RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 NAP1L6A6NFF2 107 aa13.74□□□□□ -0.21
SF3A1-205ENST00000463818 ANXA3P12429 323 aa13.74□□□□□ -0.21
SF3A1-205ENST00000463818 TRIQKQ629K1 86 aa13.74□□□□□ -0.21
SF3A1-205ENST00000463818 C7orf50Q9BRJ6 194 aaKnown RBP13.74□□□□□ -0.21
SF3A1-205ENST00000463818 MFFQ9GZY8 342 aa13.74□□□□□ -0.21
SF3A1-205ENST00000463818 TOMM40O96008 361 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 IFNA4P05014 189 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 PSG1P11464 419 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 SRPXP78539 464 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 MORN3Q6PF18 240 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-205ENST00000463818 RAB40CQ96S21 281 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 CCDC32Q9BV29 185 aa13.73□□□□□ -0.21
SF3A1-205ENST00000463818 SPP1P10451 314 aa13.72□□□□□ -0.21
SF3A1-205ENST00000463818 BTCP35070 178 aa13.72□□□□□ -0.21
SF3A1-205ENST00000463818 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
SF3A1-205ENST00000463818 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
SF3A1-205ENST00000463818 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
SF3A1-205ENST00000463818 BUB3O43684 328 aa13.71□□□□□ -0.21
SF3A1-205ENST00000463818 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-205ENST00000463818 TMEM128Q5BJH2 165 aa13.71□□□□□ -0.21
SF3A1-205ENST00000463818 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.21
SF3A1-205ENST00000463818 OR51G1Q8NGK1 321 aa13.71□□□□□ -0.21
SF3A1-205ENST00000463818 S100ZQ8WXG8 99 aa13.71□□□□□ -0.21
SF3A1-205ENST00000463818 C4BPBP20851 252 aa13.7□□□□□ -0.22
SF3A1-205ENST00000463818 GPX4P36969 197 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-205ENST00000463818 UBE2MP61081 183 aaKnown RBP13.7□□□□□ -0.22
SF3A1-205ENST00000463818 Q8NAQ8 132 aa13.7□□□□□ -0.22
SF3A1-205ENST00000463818 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
SF3A1-205ENST00000463818 AGRNO00468 2067 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 IGHV4-28A0A0C4DH34 117 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 PITX3O75364 302 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 NDUFB6O95139 128 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
SF3A1-205ENST00000463818 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 GAMTQ14353 236 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 RBMY1FQ15415 496 aaKnown RBP13.69□□□□□ -0.22
SF3A1-205ENST00000463818 SIGLEC15Q6ZMC9 328 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 LRTM2Q8N967 370 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
SF3A1-205ENST00000463818 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
SF3A1-205ENST00000463818 DUXBA0A1W2PPF3 345 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 ZNF705EA8MWA4 302 aaPredicted RBP13.68□□□□□ -0.22
SF3A1-205ENST00000463818 PLA2G10O15496 165 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 INPP1P49441 399 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 SNRPD3P62318 126 aaKnown RBP13.68□□□□□ -0.22
SF3A1-205ENST00000463818 ZNF90Q03938 601 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 CSNK1G2-AS1Q8NCQ2 148 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 C2CD4CQ8TF44 421 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 SLC35E1Q96K37 410 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 PBDC1Q9BVG4 233 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 X6R8D5 127 aa13.68□□□□□ -0.22
SF3A1-205ENST00000463818 IGKV1D-37A0A075B6S9 117 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 CENPXA8MT69 81 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 IAPPP10997 89 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 MIFP14174 115 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 VAMP1P23763 118 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 RPP25LQ8N5L8 163 aaKnown RBP13.67□□□□□ -0.22
SF3A1-205ENST00000463818 PFDN2Q9UHV9 154 aa13.67□□□□□ -0.22
SF3A1-205ENST00000463818 KMT2AQ03164 3969 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 RAB11AP62491 216 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 CENPSQ8N2Z9 138 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 HRH4Q9H3N8 390 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
SF3A1-205ENST00000463818 PAIP2BQ9ULR5 123 aaKnown RBP13.66□□□□□ -0.22
SF3A1-205ENST00000463818 H3BMM0 161 aa13.65□□□□□ -0.22
SF3A1-205ENST00000463818 DEDDO75618 318 aa13.65□□□□□ -0.22
SF3A1-205ENST00000463818 SFT2D2O95562 160 aa13.65□□□□□ -0.22
SF3A1-205ENST00000463818 SLC25A6P12236 298 aa13.65□□□□□ -0.22
SF3A1-205ENST00000463818 NUP62P37198 522 aaPredicted RBP13.65□□□□□ -0.22
SF3A1-205ENST00000463818 WDR12Q9GZL7 423 aaKnown RBP13.65□□□□□ -0.22
SF3A1-205ENST00000463818 ELOA3CA0A087WX78 387 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-205ENST00000463818 SNRPGP15A8MWD9 76 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 LYRM1O43325 122 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 MED6O75586 246 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 FABP1P07148 127 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 LYZP61626 148 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
SF3A1-205ENST00000463818 PPP1R1AQ13522 171 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 OR2F1Q13607 317 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 TMED3Q9Y3Q3 217 aa13.64□□□□□ -0.23
SF3A1-205ENST00000463818 IGLL5B9A064 214 aa13.63□□□□□ -0.23
SF3A1-205ENST00000463818 C11orf94C9JXX5 98 aa13.63□□□□□ -0.23
SF3A1-205ENST00000463818 NKX2-1P43699 371 aaPredicted RBP13.63□□□□□ -0.23
SF3A1-205ENST00000463818 TCTAP57738 103 aa13.63□□□□□ -0.23
SF3A1-205ENST00000463818 TRGV9Q99603 122 aa13.63□□□□□ -0.23
SF3A1-205ENST00000463818 MAGT1Q9H0U3 335 aa13.63□□□□□ -0.23
SF3A1-205ENST00000463818 WRBO00258 174 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 HOXB5P09067 269 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 ID1P41134 155 aa13.62□□□□□ -0.23
SF3A1-205ENST00000463818 DEFB1P60022 68 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms