RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NPIPB3Q92617 1050 aa10.17□□□□□ -0.78
SMC1A-204ENST00000463684 ZNF486Q96H40 463 aaPredicted RBP10.17□□□□□ -0.78
SMC1A-204ENST00000463684 RCVRNP35243 200 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 FAM78BQ5VT40 261 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 OR51G1Q8NGK1 321 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 ACY3Q96HD9 319 aa10.16□□□□□ -0.78
SMC1A-204ENST00000463684 WDR12Q9GZL7 423 aaKnown RBP10.16□□□□□ -0.78
SMC1A-204ENST00000463684 LYRM9A8MSI8 78 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 F5H768 121 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 DEFB130BP0DP73 79 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 DEFB130AP0DP74 79 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 PSG1P11464 419 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 PI3P19957 117 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 CLINT1Q14677 625 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 OR52E5Q8NH55 327 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 PBDC1Q9BVG4 233 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.15□□□□□ -0.78
SMC1A-204ENST00000463684 RAB26Q9ULW5 256 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
SMC1A-204ENST00000463684 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 ANKRD65E5RJM6 399 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 PAX9P55771 341 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 SP6Q3SY56 376 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 NOXA1Q86UR1 476 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 SLC24A4Q8NFF2 622 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 RNF125Q96EQ8 232 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 ABHD1Q96SE0 405 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 Q9H8V8 135 aa10.14□□□□□ -0.79
SMC1A-204ENST00000463684 A0A0G2JRQ6 117 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 A0A0J9YX75 114 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 CEBPZOSA8MTT3 80 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 F6UB75 175 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 ATP5G1P05496 136 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 ATP5G3P48201 142 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 KRTAP10-2P60368 255 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 OR8G2PQ6IF36 304 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 FAM219AQ8IW50 185 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 IGF2BP2-AS1Q96M15 143 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 COPZ2Q9P299 210 aa10.13□□□□□ -0.79
SMC1A-204ENST00000463684 ZNF705GA8MUZ8 300 aaPredicted RBP10.12□□□□□ -0.79
SMC1A-204ENST00000463684 ISLRO14498 428 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 NXPH3O95157 252 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 AARDQ4LEZ3 155 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 C1orf194Q5T5A4 169 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 SAMD13Q5VXD3 122 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 SSX7Q7RTT5 188 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 SNX29P2Q8IUI4 249 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 CCDC71LQ8N9Z2 235 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 ZFAND1Q8TCF1 268 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 DOK5Q9P104 306 aa10.12□□□□□ -0.79
SMC1A-204ENST00000463684 SOCS3O14543 225 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
SMC1A-204ENST00000463684 UCP1P25874 307 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 RPS19P39019 145 aaKnown RBP10.11□□□□□ -0.79
SMC1A-204ENST00000463684 B2MP61769 119 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 SUPT4H1P63272 117 aaKnown RBP10.11□□□□□ -0.79
SMC1A-204ENST00000463684 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
SMC1A-204ENST00000463684 OR4C16Q8NGL9 310 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 PPP1R14BQ96C90 147 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 GPR146Q96CH1 333 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
SMC1A-204ENST00000463684 CBY3A6NI87 242 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 PRM2P04554 102 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 TSPOP30536 169 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
SMC1A-204ENST00000463684 LHFPL1Q86WI0 220 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 OR8I2Q8N0Y5 310 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 RNF141Q8WVD5 230 aa10.1□□□□□ -0.79
SMC1A-204ENST00000463684 ZFP92A6NM28 416 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 INSP01308 110 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 FABP1P07148 127 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 TGFBR1P36897 503 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 MEOX2P50222 304 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 FCN2Q15485 313 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 NEDD8Q15843 81 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 ARRDC1Q8N5I2 433 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 TMEM170AQ8WVE7 144 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 PTTG2Q9NZH5 202 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 COMMD3Q9UBI1 195 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 CACNG5Q9UF02 275 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 CACFD1Q9UGQ2 172 aa10.09□□□□□ -0.79
SMC1A-204ENST00000463684 SNRPGP15A8MWD9 76 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 DUSP14O95147 198 aaKnown RBP10.08□□□□□ -0.8
SMC1A-204ENST00000463684 CDS2O95674 445 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 APOA1P02647 267 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 LYZP61626 148 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 DLK1P80370 383 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 AMTNQ6UX39 209 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 RBPMSQ93062 196 aaKnown RBP10.08□□□□□ -0.8
SMC1A-204ENST00000463684 TMEM222Q9H0R3 208 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 Q9H3A6 140 aa10.08□□□□□ -0.8
SMC1A-204ENST00000463684 A0A1W2PPQ1 181 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 A8MTW9 85 aa10.07□□□□□ -0.8
SMC1A-204ENST00000463684 M0R2Z0 102 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms