RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 LY6G6CO95867 125 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 NUP62P37198 522 aaPredicted RBP14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 PYDC2Q56P42 97 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 OR8G2PQ6IF36 304 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 CCDC190Q86UF4 302 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 Q8NAQ8 132 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 OR1S1Q8NH92 325 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 HRH4Q9H3N8 390 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 NRN1Q9NPD7 142 aa14.95□□□□□ -0.02
PDLIM4-205ENST00000463615 GAMTQ14353 236 aa14.94□□□□□ -0.02
PDLIM4-205ENST00000463615 CSNK1G2-AS1Q8NCQ2 148 aa14.94□□□□□ -0.02
PDLIM4-205ENST00000463615 RNF125Q96EQ8 232 aa14.94□□□□□ -0.02
PDLIM4-205ENST00000463615 RAB40CQ96S21 281 aa14.94□□□□□ -0.02
PDLIM4-205ENST00000463615 IGKV1D-37A0A075B6S9 117 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 KNCNA6PVL3 124 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 IFNA4P05014 189 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 C4BPBP20851 252 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 S100A5P33763 92 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 NANOS2P60321 138 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 SIGLEC15Q6ZMC9 328 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 TMED4Q7Z7H5 227 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 RBM38Q9H0Z9 239 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 PFDN2Q9UHV9 154 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 TMED3Q9Y3Q3 217 aa14.93□□□□□ -0.02
PDLIM4-205ENST00000463615 ZNF701M0R085 212 aaPredicted RBP14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 MIFP14174 115 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 TCTAP57738 103 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 SNRPD3P62318 126 aaKnown RBP14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 PSMG4Q5JS54 123 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 ACTL10Q5JWF8 245 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 LGALS9CQ6DKI2 356 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 SLC35E1Q96K37 410 aa14.92□□□□□ -0.02
PDLIM4-205ENST00000463615 SFT2D2O95562 160 aa14.91□□□□□ -0.02
PDLIM4-205ENST00000463615 X6R8D5 127 aa14.91□□□□□ -0.02
PDLIM4-205ENST00000463615 ZFP92A6NM28 416 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 FABP1P07148 127 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 UBE2MP61081 183 aaKnown RBP14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 RAB11AP62491 216 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 C1orf194Q5T5A4 169 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 CIB3Q96Q77 187 aaPredicted RBP14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 TRGV9Q99603 122 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 KMT2AQ03164 3969 aa14.9□□□□□ -0.02
PDLIM4-205ENST00000463615 IGHV4-28A0A0C4DH34 117 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 MED6O75586 246 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 RBMY1A1P0DJD3 496 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 RBMY1CP0DJD4 496 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 VAMP1P23763 118 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 NKX2-1P43699 371 aaPredicted RBP14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 ZNF90Q03938 601 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 PPP1R1AQ13522 171 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 RBMY1FQ15415 496 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 THAP8Q8NA92 274 aa14.89□□□□□ -0.03
PDLIM4-205ENST00000463615 C11orf94C9JXX5 98 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 PRSS46E5RG02 174 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 H3BMM0 161 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 DEFB4AO15263 64 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 NUTF2P61970 127 aaKnown RBP14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 CENPSQ8N2Z9 138 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 C1QTNF4Q9BXJ3 329 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 FBXL17Q9UF56 701 aa14.88□□□□□ -0.03
PDLIM4-205ENST00000463615 IGKV1OR2-108A0A075B7D4 117 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 SNRPGP15A8MWD9 76 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 SYNGR2O43760 224 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 CFDP00746 253 aaPredicted RBP14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 HLA-DRB4P13762 266 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 C2CD4CQ8TF44 421 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 CLUHP3Q96NS8 147 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 SRRQ9GZT4 340 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 TBC1D24Q9ULP9 559 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 HLA-DRB4X5D2U9 266 aa14.87□□□□□ -0.03
PDLIM4-205ENST00000463615 CCDC160A6NGH7 325 aa14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 IAPPP10997 89 aa14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 RPP30P78346 268 aaKnown RBP14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 SPANXN2Q5MJ10 180 aa14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 PBDC1Q9BVG4 233 aa14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 SLC45A2Q9UMX9 530 aa14.86□□□□□ -0.03
PDLIM4-205ENST00000463615 NAP1L6A6NFF2 107 aa14.85□□□□□ -0.03
PDLIM4-205ENST00000463615 SOCS3O14543 225 aa14.85□□□□□ -0.03
PDLIM4-205ENST00000463615 VPS13DQ5THJ4 4388 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 ELOA3CA0A087WX78 387 aaPredicted RBP14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 PSMB3P49720 205 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 LYZP61626 148 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 ID3Q02535 119 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 SAMD13Q5VXD3 122 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 GGNBP1Q5YKI7 109 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 WDR12Q9GZL7 423 aaKnown RBP14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 CLEC5AQ9NY25 188 aa14.84□□□□□ -0.03
PDLIM4-205ENST00000463615 NDUFB6O95139 128 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 HOXB5P09067 269 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 HLA-DMBP28068 263 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 ID1P41134 155 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 FOXI2Q6ZQN5 318 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 NEU1Q99519 415 aa14.83□□□□□ -0.04
PDLIM4-205ENST00000463615 C9orf170A2RU37 121 aa14.82□□□□□ -0.04
PDLIM4-205ENST00000463615 SPATA31B1PQ5VZV4 182 aa14.82□□□□□ -0.04
PDLIM4-205ENST00000463615 RPP25LQ8N5L8 163 aaKnown RBP14.82□□□□□ -0.04
PDLIM4-205ENST00000463615 MAGT1Q9H0U3 335 aa14.82□□□□□ -0.04
PDLIM4-205ENST00000463615 SAV1Q9H4B6 383 aaPredicted RBP14.82□□□□□ -0.04
PDLIM4-205ENST00000463615 APLNQ9ULZ1 77 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms