RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ID3Q02535 119 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 ZNF124Q15973 351 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 SPANXN5Q5MJ07 72 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 C16orf54Q6UWD8 224 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 S100ZQ8WXG8 99 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 PFDN2Q9UHV9 154 aa12□□□□□ -0.49
COL1A1-202ENST00000463440 STRAPQ9Y3F4 350 aaKnown RBP12□□□□□ -0.49
COL1A1-202ENST00000463440 MPTX1A8MV57 137 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 K7EQG2 157 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 SPRY2O43597 315 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 TCRBP04435 133 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-202ENST00000463440 DEFB135Q30KP9 77 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 OR4D5Q8NGN0 318 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 GLMPQ8WWB7 406 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 PBDC1Q9BVG4 233 aa11.99□□□□□ -0.49
COL1A1-202ENST00000463440 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 POLR2GP62487 172 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL1A1-202ENST00000463440 ZNF90Q03938 601 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 IAH1Q2TAA2 248 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-202ENST00000463440 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 TRGV9Q99603 122 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 CSTL1Q9H114 145 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
COL1A1-202ENST00000463440 A6NHS1 94 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 SNRPGP15A8MWD9 76 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 H3BP45 60 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 BUB3O43684 328 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 LEMD1Q68G75 181 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 DCANP1Q8TF63 244 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 RNF183Q96D59 192 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
COL1A1-202ENST00000463440 KMT2CQ8NEZ4 4911 aaKnown RBP11.97□□□□□ -0.49
COL1A1-202ENST00000463440 TRAV6A0A075B6T7 132 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 PRSS46E5RG02 174 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 SSSCA1O60232 199 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 SCGB1D2O95969 90 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 ZNF688P0C7X2 276 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 LYZP61626 148 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 OR2F1Q13607 317 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 MZT2BQ6NZ67 158 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 SIGLEC15Q6ZMC9 328 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 ZBTB8BQ8NAP8 495 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-202ENST00000463440 SMIM8Q96KF7 97 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
COL1A1-202ENST00000463440 FAM240BA0A1B0GVZ2 78 aa11.95□□□□□ -0.5
COL1A1-202ENST00000463440 CFDP00746 253 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-202ENST00000463440 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
COL1A1-202ENST00000463440 STHQ8IWL8 128 aa11.95□□□□□ -0.5
COL1A1-202ENST00000463440 NRN1Q9NPD7 142 aa11.95□□□□□ -0.5
COL1A1-202ENST00000463440 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 SNRPD3P62318 126 aaKnown RBP11.94□□□□□ -0.5
COL1A1-202ENST00000463440 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 ACOT7LQ6ZUV0 252 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 ZNF431Q8TF32 576 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-202ENST00000463440 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 WDR12Q9GZL7 423 aaKnown RBP11.94□□□□□ -0.5
COL1A1-202ENST00000463440 FBXL17Q9UF56 701 aa11.94□□□□□ -0.5
COL1A1-202ENST00000463440 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 CA1P00915 261 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-202ENST00000463440 TAS2R30P59541 319 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 C1orf194Q5T5A4 169 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 TMEM144Q7Z5S9 345 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 BPIFCQ8NFQ6 507 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
COL1A1-202ENST00000463440 PTTG2Q9NZH5 202 aa11.93□□□□□ -0.5
COL1A1-202ENST00000463440 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 FAM25EA8MYX2 175 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 PAX9P55771 341 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 ASAH1Q13510 395 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-202ENST00000463440 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
COL1A1-202ENST00000463440 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 KNCNA6PVL3 124 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 CCSO14618 274 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 TSC22D2O75157 780 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 MBPP02686 304 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-202ENST00000463440 S100A7P31151 101 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 DLK1P80370 383 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 ACTL10Q5JWF8 245 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 TMEM14EPQ6UXP3 125 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 TRPT1Q86TN4 253 aaKnown RBP11.91□□□□□ -0.5
COL1A1-202ENST00000463440 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
COL1A1-202ENST00000463440 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
COL1A1-202ENST00000463440 PMS2P5A8MQ11 134 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 UPK1BO75841 260 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms