RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 PFDN2Q9UHV9 154 aa10.3□□□□□ -0.76
SEMA3D-203ENST00000463315 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
SEMA3D-203ENST00000463315 IGKV1D-37A0A075B6S9 117 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 H3BP45 60 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 K7EPK0 472 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 L7N2F9 121 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 PSG1P11464 419 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 VAMP2P63027 116 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 DLK1P80370 383 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 FAM90A2PQ658T7 463 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 OR8G2PQ6IF36 304 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 C11orf1Q9H5F2 150 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 U3KQE9 123 aa10.29□□□□□ -0.76
SEMA3D-203ENST00000463315 TRAV2A0A0B4J234 112 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 ZNF207O43670 478 aaKnown RBP10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 IL4P05112 153 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 HNRNPCP07910 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 CD81P60033 236 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 PAFAH1B2P68402 229 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 GRAMD2BQ96HH9 432 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 RNF2Q99496 336 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 NPVFQ9HCQ7 196 aa10.28□□□□□ -0.76
SEMA3D-203ENST00000463315 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 DEDDO75618 318 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 RLN2P04090 185 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 FRMD6-AS1P0C7T7 363 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 METTL15P1P0C7V9 234 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 S100A7P31151 101 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 EIF2B2P49770 351 aaKnown RBP10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 AP2S1P53680 142 aaPredicted RBP10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 ACOT7LQ6ZUV0 252 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 ST8SIA2Q92186 375 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 RNF125Q96EQ8 232 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 LYRM2Q9NU23 88 aaPredicted RBP10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 SLC45A2Q9UMX9 530 aa10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.77
SEMA3D-203ENST00000463315 OR11H12B2RN74 326 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 GOSR2O14653 212 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 SSNA1O43805 119 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 CD7P09564 240 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 SELENOTP62341 195 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 ZNF90Q03938 601 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 AKR1C1Q04828 323 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 RAB32Q13637 225 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 TUBA4BQ9H853 241 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 MGAT4CQ9UBM8 478 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 RABAC1Q9UI14 185 aa10.26□□□□□ -0.77
SEMA3D-203ENST00000463315 HELTA6NFD8 242 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 BUB3O43684 328 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 P2RY1P47900 373 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 H2BFSP57053 126 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 USF2Q15853 346 aaPredicted RBP10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 LINC00322Q6ZN03 302 aaPredicted RBP10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
SEMA3D-203ENST00000463315 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 DFFBO76075 338 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 PET100P0DJ07 73 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 S100A11P31949 105 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 SULT1A1P50225 295 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 BCAP31P51572 246 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 CAV2P51636 162 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 S100A10P60903 97 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 HBG1P69891 147 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 HBG2P69892 147 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 RGS21Q2M5E4 152 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 S100A7AQ86SG5 101 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 STX12Q86Y82 276 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
SEMA3D-203ENST00000463315 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 E5RGE8 158 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 PLP1P60201 277 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 TNP2Q05952 138 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 ATP6V1FQ16864 119 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 PXDC1Q5TGL8 231 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 TMEM252Q8N6L7 170 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 ASB13Q8WXK3 278 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 SLC25A31Q9H0C2 315 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 RNF24Q9Y225 148 aa10.23□□□□□ -0.77
SEMA3D-203ENST00000463315 SMCO3A2RU48 225 aa10.22□□□□□ -0.77
SEMA3D-203ENST00000463315 DNASE2O00115 360 aaPredicted RBP10.22□□□□□ -0.77
SEMA3D-203ENST00000463315 CCNKO75909 580 aa10.22□□□□□ -0.77
SEMA3D-203ENST00000463315 SIX6O95475 246 aa10.22□□□□□ -0.77
SEMA3D-203ENST00000463315 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
SEMA3D-203ENST00000463315 ARL16Q0P5N6 197 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms