RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 ZNF600Q6ZNG1 722 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 KLHL30-AS1Q8NEE0 82 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 OR2G3Q8NGZ4 309 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 SEC11BP0C7V7 166 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 SERF2P84101 59 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 FHL3Q13643 280 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 C8orf86Q6ZUL3 223 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 GPHB5Q86YW7 130 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 STPG3Q8N7X2 389 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 RAX2Q96IS3 184 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 SLC39A9Q9NUM3 307 aa11□□□□□ -0.65
COL6A1-202ENST00000463060 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 C17orf112F2Z3M2 114 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 NDUFA4O00483 81 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 FABP1P07148 127 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 RELQ04864 619 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-202ENST00000463060 ZNF616Q08AN1 781 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 KLF5Q13887 457 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-202ENST00000463060 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 ZNF709Q8N972 641 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 Q8WTZ3 238 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 SLC25A32Q9H2D1 315 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 PXMP4Q9Y6I8 212 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
COL6A1-202ENST00000463060 A0A1W2PRX2 142 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 LINC01619G3V211 115 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 B2MP61769 119 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 OR11H1Q8NG94 326 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 RCC1LQ96I51 464 aaKnown RBP10.98□□□□□ -0.65
COL6A1-202ENST00000463060 MDFIQ99750 246 aa10.98□□□□□ -0.65
COL6A1-202ENST00000463060 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
COL6A1-202ENST00000463060 PUS1Q9Y606 427 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL6A1-202ENST00000463060 NUDT19A8MXV4 375 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 CCL24O00175 119 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 TSPAN15O95858 294 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
COL6A1-202ENST00000463060 IFITM2Q01629 132 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
COL6A1-202ENST00000463060 PXDC1Q5TGL8 231 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 TEX261Q6UWH6 196 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 TMEM37Q8WXS4 190 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 DUX3Q96PT4 197 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 VSIRQ9H7M9 311 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
COL6A1-202ENST00000463060 LGALS9O00182 355 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 IL4P05112 153 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 ZP3P21754 424 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 MYCNOSP40205 109 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 RPEL1Q2QD12 228 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 GCSAMLQ5JQS6 135 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 REC114Q7Z4M0 266 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 RNF125Q96EQ8 232 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 RPRMQ9NS64 109 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 U3KQE9 123 aa10.96□□□□□ -0.65
COL6A1-202ENST00000463060 K7EMT4 169 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 M6PRP20645 277 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 CRYBB3P26998 211 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 SLURP1P55000 103 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 NSUN5P1Q3KNT7 163 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 EIF5AL1Q6IS14 154 aaKnown RBP10.95□□□□□ -0.66
COL6A1-202ENST00000463060 Q6ZRG5 221 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 RPP25LQ8N5L8 163 aaKnown RBP10.95□□□□□ -0.66
COL6A1-202ENST00000463060 ZNF680Q8NEM1 530 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 DPF1Q92782 380 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 STAB1Q9NY15 2570 aa10.95□□□□□ -0.66
COL6A1-202ENST00000463060 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-202ENST00000463060 A8MWP6 167 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 UMAD1C9J7I0 102 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 HYPMO75409 117 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 ORM2P19652 201 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 SULT1A2P50226 295 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 ELLP55199 621 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-202ENST00000463060 RAB2AP61019 212 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 LYZP61626 148 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 ACOT6Q3I5F7 207 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-202ENST00000463060 ALKAL2Q6UX46 152 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 C12orf54Q6X4T0 127 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
COL6A1-202ENST00000463060 DLX4Q92988 240 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-202ENST00000463060 IGHV3OR16-8A0A075B7F1 116 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms