RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 INO80EQ8NBZ0 244 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-206ENST00000462613 OR11H7Q8NGC8 314 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 RNF125Q96EQ8 232 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 PBDC1Q9BVG4 233 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM147Q9BVK8 224 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 MBD2Q9UBB5 411 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 VWFP04275 2813 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 MGAM2Q2M2H8 2515 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 PKD1L1Q8TDX9 2849 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 IGHV7-4-1A0A0J9YVY3 117 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 UBE2L5PA0A1B0GUS4 154 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 IGSF23A1L1A6 192 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 HELTA6NFD8 242 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 PMS2P5A8MQ11 134 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 PRSS46E5RG02 174 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 C17orf112F2Z3M2 114 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF207O43670 478 aaKnown RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 CCNKO75909 580 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 IFNA5P01569 189 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 C8orf88P0DMB2 117 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 GP9P14770 177 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 RPL12P30050 165 aaKnown RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 AP2S1P53680 142 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 CMC4P56277 68 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 EGFEM1PQ0D2K5 195 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 OR2F1Q13607 317 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF266Q14584 549 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 BEAN1Q3B7T3 259 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 PXDC1Q5TGL8 231 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 BTNL8Q6UX41 500 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 CYP2G1PQ6ZSU1 146 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 OR5C1Q8NGR4 320 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 OR2T35Q8NGX2 323 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 SCGB1C1Q8TD33 95 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 SPAG8Q99932 426 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 RHPN1-AS1Q9BWJ2 59 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 ZFAND3Q9H8U3 227 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
SF3B1-206ENST00000462613 FBXL17Q9UF56 701 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 SMPXQ9UHP9 88 aa4.85□□□□□ -1.63
SF3B1-206ENST00000462613 FXYD6-FXYD2A0A087WZ82 144 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 OR4C46A6NHA9 309 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-206ENST00000462613 AGPAT2O15120 278 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 HYPMO75409 117 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 OR5G3P0C626 314 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 LINC00869P0C866 280 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 ORM2P19652 201 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 FGF7P21781 194 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 CRYBB3P26998 211 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 CAMLGP49069 296 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 DEFA6Q01524 100 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF90Q03938 601 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 CLINT1Q14677 625 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 DEFB114Q30KQ6 69 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 CD300EQ496F6 205 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-206ENST00000462613 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-206ENST00000462613 STPG3Q8N7X2 389 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 OR1L4Q8NGR5 311 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 OR1B1Q8NGR6 318 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 WDR89Q96FK6 387 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-206ENST00000462613 PFDN5Q99471 154 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 ATP5SQ99766 215 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 C11orf1Q9H5F2 150 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 SLC45A2Q9UMX9 530 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 HSPB11Q9Y547 144 aa4.84□□□□□ -1.63
SF3B1-206ENST00000462613 IGKV1D-37A0A075B6S9 117 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 IGHV3OR16-13A0A075B7E8 117 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 ELOA3CA0A087WX78 387 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-206ENST00000462613 IGHV3-49A0A0A0MS15 119 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 BORCS7-ASMTA0A0B4J1R7 106 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 IGHV3-74A0A0B4J1X5 117 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 WI2-2373I1.2A0A1W2PRP0 233 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 H0YIZ8 118 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 CHEK1O14757 476 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 TSPAN4O14817 238 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 COX7A2P2O60397 106 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 LYL1P12980 280 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 GALR1P47211 349 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 CD81P60033 236 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 B2MP61769 119 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 NHLH2Q02577 135 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 ARL16Q0P5N6 197 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 VWC2Q2TAL6 325 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 C1orf194Q5T5A4 169 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 SAMD13Q5VXD3 122 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 IL34Q6ZMJ4 242 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 TCF24Q7RTU0 167 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 TMEM61Q8N0U2 210 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 OR8I2Q8N0Y5 310 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 MRAPQ8TCY5 172 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 GPR82Q96P67 336 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 PRR25Q96S07 402 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 RNF126Q9BV68 326 aa4.83□□□□□ -1.64
SF3B1-206ENST00000462613 ARL6Q9H0F7 186 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms