RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ASCL5Q7RTU5 278 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 S100A7AQ86SG5 101 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TEX45Q8NA69 505 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 OR4F17Q8NGA8 305 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 C8orf46Q8TAG6 207 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 MLST8Q9BVC4 326 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 FNDC4Q9H6D8 234 aaPredicted RBP2.83□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM14CQ9P0S9 112 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 SH3BGRL2Q9UJC5 107 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 RNF24Q9Y225 148 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4AQ9Y536 164 aa2.83□□□□□ -1.96
COL8A1-204ENST00000462604 ARID1AO14497 2285 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PCDH15Q96QU1 1955 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4EA0A075B759 164 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 A0A1W2PPI3 338 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 hDV102S1A0JD36 115 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SH2D7A6NKC9 451 aaPredicted RBP2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CGB1A6NKQ9 187 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 C17orf100A8MU93 164 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 C22orf46C9J442 243 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 NPIPB6E9PJ23 425 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4DF5H284 164 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM178BH3BS89 294 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 M0QZ24 198 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SCGB2A1O75556 95 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CEACAM4O75871 244 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV3-48P01763 117 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CRYGCP07315 174 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 FAM87AP0C7U9 286 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PPIAL4FP0DN26 164 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 COL8A1P27658 744 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CDKN1BP46527 198 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CSN1S1P47710 185 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF137PP52743 207 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ARF6P62330 175 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 CCL8P80075 99 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SRSF2Q01130 221 aaKnown RBP2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PAX2Q02962 417 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SAPCD1Q5SSQ6 148 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 BVES-AS1Q5T3Y7 98 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ASPHD1Q5U4P2 390 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PVRIGQ6DKI7 326 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 HCP5Q6MZN7 132 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ZNF841Q6ZN19 808 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 GOLT1AQ6ZVE7 132 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SPATA12Q7Z6I5 190 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PRNTQ86SH4 94 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 BPIFA4PQ86YQ2 179 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 WFDC8Q8IUA0 241 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM75Q8N9X5 138 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM116Q8NCL8 245 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 OR10AG1Q8NH19 301 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 TNFRSF14Q92956 283 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ST6GALNAC6Q969X2 333 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 GUCD1Q96NT3 240 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 RASL11BQ9BPW5 248 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SRSF8Q9BRL6 282 aaKnown RBP2.82□□□□□ -1.96
COL8A1-204ENST00000462604 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SCNM1Q9BWG6 230 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 PRSS22Q9GZN4 317 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 TMEM133Q9H2Q1 129 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 ZMAT4Q9H898 229 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 DYNLRB1Q9NP97 96 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SCRT2Q9NQ03 307 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 FAM215AQ9Y5M1 114 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 F11RQ9Y624 299 aaKnown RBP2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SHANK1Q9Y566 2161 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 SZT2Q5T011 3432 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 KMT2EQ8IZD2 1858 aa2.82□□□□□ -1.96
COL8A1-204ENST00000462604 RANBP2P49792 3224 aaKnown RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 ASXL3Q9C0F0 2248 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TRBV19A0A075B6N1 114 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV3-21A0A0B4J1V1 117 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 MUC21A0A0G2JKD1 596 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 MUC21A0A140T8X8 626 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 A0A1B0GUT8 65 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 SERTM2A0A1B0GWG4 89 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 A6NDN8 102 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CBY3A6NI87 242 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TEX22C9J3V5 150 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 E7EUB6 86 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 H0Y8G0 127 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 C16orf97H3BN30 126 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 H3BTX0 84 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 TAX1BP3O14907 124 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CD5LO43866 347 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 NUDT3O95989 172 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 APOHP02749 345 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RBP4P02753 201 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 PPBPP02775 128 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 FTH1P19P0C7X4 201 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CT45A10P0DMU9 189 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 COX8AP10176 69 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 HOXB4P17483 251 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 LOXP28300 417 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 CEACAM8P31997 349 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-204ENST00000462604 GPR183P32249 361 aa2.81□□□□□ -1.96
COL8A1-204ENST00000462604 RBX1P62877 108 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms