RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 COMPP49747 757 aaPredicted RBP13.55□□□□□ -0.24
ACTB-207ENST00000462494 TPTE2P1Q5T6R2 138 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 CLEC7AQ9BXN2 247 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 EPDR1Q9UM22 224 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 RELNP78509 3460 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 KIR2DL5BA0A0G2JN68 375 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 KIR2DL5BA0A0G2JPC4 375 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 FAM90A27PA6NNH2 459 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 ZZEF1O43149 2961 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 PMCHP20382 165 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 CASP6P55212 293 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 KRTDAPP60985 99 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
ACTB-207ENST00000462494 OR10J3Q5JRS4 329 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 PPP1R27Q86WC6 154 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 KIR2DL5AQ8N109 375 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 TNFRSF14Q92956 283 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 TRGV9Q99603 122 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 FBXL15Q9H469 300 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 CEP295Q9C0D2 2601 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 PPIAL4CA0A0B4J2A2 164 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 HYPMO75409 117 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 GPX1P07203 203 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 CRYGBP07316 175 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 NBEAP1P0C6P0 100 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 PPIAL4GP0DN37 164 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 MUC15Q8N387 334 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 RPEQ96AT9 228 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 VKORC1Q9BQB6 163 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 TBL2Q9Y4P3 447 aaKnown RBP13.54□□□□□ -0.24
ACTB-207ENST00000462494 TPRP12270 2363 aaKnown RBP13.54□□□□□ -0.24
ACTB-207ENST00000462494 AMTP48728 403 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 SLAQ13239 276 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 PLGLAQ15195 96 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 ZNF841Q6ZN19 808 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 GRAMD2BQ96HH9 432 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 FBXL7Q9UJT9 491 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 PAM16Q9Y3D7 125 aa13.54□□□□□ -0.24
ACTB-207ENST00000462494 LRBAP50851 2863 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 CORTO00230 105 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 MYCNOSP40205 109 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 TMEM183BQ1AE95 376 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 KCNS1Q96KK3 526 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 RNF114Q9Y508 228 aa13.53□□□□□ -0.24
ACTB-207ENST00000462494 TLN1Q9Y490 2541 aaKnown RBP13.53□□□□□ -0.24
ACTB-207ENST00000462494 A0A1W2PS18 150 aa13.52□□□□□ -0.24
ACTB-207ENST00000462494 GRNP28799 593 aaKnown RBP13.52□□□□□ -0.24
ACTB-207ENST00000462494 ZNF705AQ6ZN79 300 aaPredicted RBP13.52□□□□□ -0.24
ACTB-207ENST00000462494 SCNM1Q9BWG6 230 aa13.52□□□□□ -0.24
ACTB-207ENST00000462494 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.24
ACTB-207ENST00000462494 ONECUT1Q9UBC0 465 aa13.52□□□□□ -0.24
ACTB-207ENST00000462494 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.24
ACTB-207ENST00000462494 TEX22C9J3V5 150 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 K7ENP7 123 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 LYZP61626 148 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 PVRIGQ6DKI7 326 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 TEX43Q6ZNM6 134 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 MBD6Q96DN6 1003 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 ABCA1O95477 2261 aa13.52□□□□□ -0.25
ACTB-207ENST00000462494 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
ACTB-207ENST00000462494 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 HIGD1CA8MV81 97 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 CAMPP49913 170 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 FAM19A2Q8N3H0 131 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
ACTB-207ENST00000462494 NEU1Q99519 415 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 VAMP8Q9BV40 100 aa13.51□□□□□ -0.25
ACTB-207ENST00000462494 GP9P14770 177 aa13.5□□□□□ -0.25
ACTB-207ENST00000462494 PRR31Q5SQ13 230 aa13.5□□□□□ -0.25
ACTB-207ENST00000462494 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
ACTB-207ENST00000462494 SSBP4Q9BWG4 385 aaPredicted RBP13.5□□□□□ -0.25
ACTB-207ENST00000462494 Q9H3A6 140 aa13.5□□□□□ -0.25
ACTB-207ENST00000462494 HIGD1AQ9Y241 93 aa13.5□□□□□ -0.25
ACTB-207ENST00000462494 LY6HO94772 140 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 CNIH1O95406 144 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 RBP4P02753 201 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 PSG1P11464 419 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 NTF3P20783 257 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 TSKUQ8WUA8 353 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 GPR82Q96P67 336 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 CHRDL1Q9BU40 450 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 DIRC3C9JPN6 131 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 M0R143 59 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 ZNF324O75467 553 aaPredicted RBP13.49□□□□□ -0.25
ACTB-207ENST00000462494 GPR6P46095 362 aaPredicted RBP13.49□□□□□ -0.25
ACTB-207ENST00000462494 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
ACTB-207ENST00000462494 C7orf69Q9H7B7 122 aa13.49□□□□□ -0.25
ACTB-207ENST00000462494 SIAH2O43255 324 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 TOX4O94842 621 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 SSTP61278 116 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 TCF24Q7RTU0 167 aa13.48□□□□□ -0.25
ACTB-207ENST00000462494 C5orf17Q8NAS9 161 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms