RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 BANF1O75531 89 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 SULT1C4O75897 302 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 COX4I1P13073 169 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 PIGPP57054 158 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 RPS11P62280 158 aaKnown RBP eCLIP4.81□□□□□ -1.64
LRCH3-210ENST00000461674 PRSS54Q6PEW0 395 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 Q6ZTC4 211 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 ZFAND2AQ8N6M9 145 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 MAPK1IP1LQ8NDC0 245 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 RNASE6Q93091 150 aaKnown RBP4.81□□□□□ -1.64
LRCH3-210ENST00000461674 GABARAPL1Q9H0R8 117 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 EFCAB1Q9HAE3 211 aa4.81□□□□□ -1.64
LRCH3-210ENST00000461674 TDRD6O60522 2096 aaKnown RBP4.81□□□□□ -1.64
LRCH3-210ENST00000461674 LAMA5O15230 3695 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 A0A096LNJ9 63 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 J3KT08 172 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 DBIP07108 87 aaKnown RBP4.8□□□□□ -1.64
LRCH3-210ENST00000461674 RPL7P18124 248 aaKnown RBP4.8□□□□□ -1.64
LRCH3-210ENST00000461674 POLR2HP52434 150 aaKnown RBP4.8□□□□□ -1.64
LRCH3-210ENST00000461674 ZNF616Q08AN1 781 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 OR8B8Q15620 311 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 Q6ZS52 159 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 DAND5Q8N907 189 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 OR5A1Q8NGJ0 315 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 OR13C4Q8NGS5 318 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 RBMXL1Q96E39 390 aaKnown RBP4.8□□□□□ -1.64
LRCH3-210ENST00000461674 SEC22CQ9BRL7 303 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 RNF122Q9H9V4 155 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 COPZ2Q9P299 210 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 LAMA4Q16363 1823 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 PATJQ8NI35 1801 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 APC2O95996 2303 aa4.8□□□□□ -1.64
LRCH3-210ENST00000461674 ZNF462Q96JM2 2506 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 ARHGAP21Q5T5U3 1957 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 TRAV36DV7A0A075B6V5 113 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 TMEM189A5PLL7 270 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 MIF4GDA9UHW6 222 aaKnown RBP4.79□□□□□ -1.64
LRCH3-210ENST00000461674 PHOX2AO14813 284 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
LRCH3-210ENST00000461674 OGNP20774 298 aaKnown RBP4.79□□□□□ -1.64
LRCH3-210ENST00000461674 RPS3P23396 243 aaKnown RBP eCLIP4.79□□□□□ -1.64
LRCH3-210ENST00000461674 RAB13P51153 203 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 LYRM7Q5U5X0 104 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 AMTNQ6UX39 209 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 C11orf42Q8N5U0 333 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 DEFB124Q8NES8 71 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 DNAJC9Q8WXX5 260 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 ABCA7Q8IZY2 2146 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 ZNF106Q9H2Y7 1883 aaKnown RBP4.79□□□□□ -1.64
LRCH3-210ENST00000461674 FREM2Q5SZK8 3169 aa4.79□□□□□ -1.64
LRCH3-210ENST00000461674 PCNX2A6NKB5 2137 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 I3L521 148 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 J3QKU1 62 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 IFNA10P01566 189 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 APOC1P02654 83 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 NPY1RP25929 384 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 CCR2P41597 374 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
LRCH3-210ENST00000461674 CCL20P78556 96 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 OR8G1Q15617 311 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 LGALS9BQ3B8N2 356 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 LGALS9CQ6DKI2 356 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 CACNA1EQ15878 2313 aa4.78□□□□□ -1.64
LRCH3-210ENST00000461674 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 SDK1Q7Z5N4 2213 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 NBEAQ8NFP9 2946 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 A0A087WUU8 490 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 PINLYPA6NC86 204 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 ZNF98A6NK75 572 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 A8MWP4 228 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 BET1O15155 118 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 ZNF861PO60384 105 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 CRYBB3P26998 211 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 WNT4P56705 351 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 MRPL51Q4U2R6 128 aaKnown RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 Q5W150 140 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 RPL22L1Q6P5R6 122 aaKnown RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 SSX8Q7RTT4 187 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 PACRGLQ8N7B6 248 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 TSTD1Q8NFU3 115 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 H1FXQ92522 213 aaKnown RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 VCXQ9H320 206 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 LINC00574Q9H8X3 128 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 USP9XQ93008 2570 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 NUP214P35658 2090 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-210ENST00000461674 LOC400499M0QZD8 3231 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 KALRNO60229 2985 aa4.77□□□□□ -1.65
LRCH3-210ENST00000461674 CFAP46Q8IYW2 2715 aa4.76□□□□□ -1.65
LRCH3-210ENST00000461674 GREB1Q4ZG55 1949 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms