RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RNF122Q9H9V4 155 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ACER3Q9NUN7 267 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 HSPB11Q9Y547 144 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ROBO3Q96MS0 1386 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 CCDC88BA6NC98 1476 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 GRIN2AQ12879 1464 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 GLI2P10070 1586 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 PPRC1Q5VV67 1664 aaKnown RBP1.16□□□□□ -2.22
HDAC6-212ENST00000461608 MIA2Q96PC5 1412 aa1.15□□□□□ -2.22
HDAC6-212ENST00000461608 ABCA10Q8WWZ4 1543 aa1.15□□□□□ -2.22
HDAC6-212ENST00000461608 ADCY10Q96PN6 1610 aa1.15□□□□□ -2.22
HDAC6-212ENST00000461608 COL11A1P12107 1806 aaPredicted RBP1.15□□□□□ -2.22
HDAC6-212ENST00000461608 IGKV1D-43A0A0B4J1Z2 117 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 IBA57-AS1B1ANH7 110 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 NDUFA2O43678 99 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 NDUFC2O95298 119 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 PMP2P02689 132 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 CSN2P05814 226 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 C8GP07360 202 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 COX6A1P12074 109 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 SPI1P17947 270 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 RPL7P18124 248 aaKnown RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 PPIBP23284 216 aaKnown RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 SRIP30626 198 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 EIF2B2P49770 351 aaKnown RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 AQP4P55087 323 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 CKS1BP61024 79 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 Q1T7F1 81 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 BRMS1LQ5PSV4 323 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 HRCT1Q6UXD1 115 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 DPPA3Q6W0C5 159 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 C7orf65Q6ZTY9 151 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 TRAPPC6BQ86SZ2 158 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 LRRC18Q8N456 261 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 OR4D11Q8NGI4 311 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 ZNF563Q8TA94 476 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 SKA2Q8WVK7 121 aaPredicted RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 H1FXQ92522 213 aaKnown RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 TCEAL4Q96EI5 215 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 ZNF625Q96I27 306 aaPredicted RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 CCDC115Q96NT0 180 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 LYSMD1Q96S90 227 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 TSC22D3Q99576 134 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 SH3BGRL3Q9H299 93 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 LRTM1Q9HBL6 345 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 LYRM2Q9NU23 88 aaPredicted RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 SLC39A9Q9NUM3 307 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 ASB4Q9Y574 426 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 LHFPL6Q9Y693 200 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 RTL1A6NKG5 1358 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 ADAMTS12P58397 1594 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 GBF1Q92538 1859 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 CAMSAP1Q5T5Y3 1602 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 MAP3K4Q9Y6R4 1608 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 CUX1P39880 1505 aa1.15□□□□□ -2.23
HDAC6-212ENST00000461608 PRG4Q92954 1404 aaPredicted RBP1.15□□□□□ -2.23
HDAC6-212ENST00000461608 MALRD1Q5VYJ5 2156 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 SYNMO15061 1565 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 TEX14Q8IWB6 1497 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 RIIAD1A6NNX1 92 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 C1orf196B1AJZ1 125 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 TRAPPC2LH3BP13 241 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 M0QZK8 103 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 KPNA4O00629 521 aaPredicted RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 IGKV1-5P01602 117 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 S100A4P26447 101 aaKnown RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 G6PCP35575 357 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 SUPT4H1P63272 117 aaKnown RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 ZNF345Q14585 488 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 MIR17HGQ75NE6 70 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 CLVS1Q8IUQ0 354 aaPredicted RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 C12orf45Q8N5I9 185 aaPredicted RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 WFDC11Q8NEX6 87 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 OR52R1Q8NGF1 315 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 OR8J3Q8NGG0 315 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 TERB2Q8NHR7 220 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 PFN4Q8NHR9 129 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 CARD19Q96LW7 228 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 SERPINI1Q99574 410 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 GINS4Q9BRT9 223 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 CCDC32Q9BV29 185 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 CACYBPQ9HB71 228 aaKnown RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 PARVBQ9HBI1 364 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 NHP2Q9NX24 153 aaKnown RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 TVP23BQ9NYZ1 205 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 JPT1Q9UK76 154 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 OR52A1Q9UKL2 312 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 PCTPQ9UKL6 214 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 TRAPPC2LQ9UL33 140 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 PAIP2BQ9ULR5 123 aaKnown RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 AMMECR1Q9Y4X0 333 aaPredicted RBP1.14□□□□□ -2.23
HDAC6-212ENST00000461608 ITGB4P16144 1822 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 HECW1Q76N89 1606 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 ERICH3Q5RHP9 1530 aa1.14□□□□□ -2.23
HDAC6-212ENST00000461608 KIAA0586Q9BVV6 1533 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms