RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 LHX2P50458 406 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 SUMO4Q6EEV6 95 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 RNF166Q96A37 237 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 TMEM126AQ9H061 195 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 TAF1P21675 1872 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 TRAV1-1A0A0B4J248 108 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 C15orf32Q32M92 178 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF474Q6S9Z5 364 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 MRPL27Q9P0M9 148 aaKnown RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 ANKRD31Q8N7Z5 1873 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 DLEU1O43261 78 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 SPAG17Q6Q759 2223 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 MLNRO43193 412 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 CD24P25063 80 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 BCORQ6W2J9 1755 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 LY75O60449 1722 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 IGHV2-26A0A0B4J1V2 119 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 A0A0G2JMM0 328 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 A0A1W2PPB8 328 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 KIR3DP1A8MWS1 328 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 USMG5Q96IX5 58 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 E9PLN8 166 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 PSG3Q16557 428 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 FAM223BA6NKX1 122 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 GREM1O60565 184 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 PSG1P11464 419 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 TPTE2P1Q5T6R2 138 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 IGHV1-18A0A0C4DH31 117 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
BRCA1-205ENST00000461221 VMO1Q7Z5L0 202 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 PLSCR4Q9NRQ2 329 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 RPUSD1Q9UJJ7 312 aaKnown RBP7.41□□□□□ -1.22
BRCA1-205ENST00000461221 NUP214P35658 2090 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-205ENST00000461221 SCN9AQ15858 1988 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 LY6G6FQ5SQ64 297 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 C1orf122Q6ZSJ8 110 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 TMEM158Q8WZ71 300 aa7.41□□□□□ -1.22
BRCA1-205ENST00000461221 LYZL4Q96KX0 146 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 AGMATQ9BSE5 352 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 SCRT1Q9BWW7 348 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 RFNGQ9Y644 331 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 C9JAW5 83 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 IGHV1-46P01743 117 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 IGHV3-53P01767 116 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF114Q8NC26 417 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
BRCA1-205ENST00000461221 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
BRCA1-205ENST00000461221 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 CD5LO43866 347 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 RPL35AP18077 110 aaKnown RBP7.4□□□□□ -1.23
BRCA1-205ENST00000461221 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.23
BRCA1-205ENST00000461221 EXOC3-AS1Q8N2X6 119 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 GTSF1LQ9H1H1 148 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 KNTC1P50748 2209 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 FOCADQ5VW36 1801 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 SELLP14151 372 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 EFNA4P52798 201 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 UBE2V1Q13404 147 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 DEFB121Q5J5C9 76 aa7.4□□□□□ -1.23
BRCA1-205ENST00000461221 DMRTC2Q8IXT2 367 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-205ENST00000461221 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 UTF1Q5T230 341 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 C11orf44Q8N8P7 122 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF837Q96EG3 531 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-205ENST00000461221 UBL5Q9BZL1 73 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 A0A087X0K7 114 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 IGLV3-32A0A0A0MS00 114 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 IGHV1-3A0A0C4DH29 117 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-205ENST00000461221 MRPL14Q6P1L8 145 aaKnown RBP7.39□□□□□ -1.23
BRCA1-205ENST00000461221 ADAMTSL5Q6ZMM2 481 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF319Q9P2F9 582 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 TRPM3Q9HCF6 1732 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-205ENST00000461221 MARF1Q9Y4F3 1742 aaKnown RBP7.39□□□□□ -1.23
BRCA1-205ENST00000461221 H0YIZ8 118 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 CXCL1P09341 107 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 IGHV1-8P0DP01 117 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 BTCP35070 178 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 LINC01551Q86U37 167 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 RNF114Q9Y508 228 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 M0R1W7 72 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 LCN12Q6JVE5 192 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 KIF13BQ9NQT8 1826 aa7.39□□□□□ -1.23
BRCA1-205ENST00000461221 FCN3O75636 299 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms