RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 IL4P05112 153 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL9A2-205ENST00000461118 PSG1P11464 419 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-205ENST00000461118 P2RY1P47900 373 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 USF2Q15853 346 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-205ENST00000461118 KIR2DL5AQ8N109 375 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 KIR2DL5BQ8NHK3 375 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 IL17DQ8TAD2 202 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 GRAMD2BQ96HH9 432 aa13.6□□□□□ -0.23
COL9A2-205ENST00000461118 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
COL9A2-205ENST00000461118 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
COL9A2-205ENST00000461118 APOC4P55056 127 aa13.59□□□□□ -0.23
COL9A2-205ENST00000461118 POLR2GP62487 172 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL9A2-205ENST00000461118 OR51G1Q8NGK1 321 aa13.59□□□□□ -0.23
COL9A2-205ENST00000461118 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
COL9A2-205ENST00000461118 NUDT15Q9NV35 164 aa13.59□□□□□ -0.23
COL9A2-205ENST00000461118 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
COL9A2-205ENST00000461118 TRAV6A0A075B6T7 132 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 UBE2CO00762 179 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
COL9A2-205ENST00000461118 ASAH1Q13510 395 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 IAH1Q2TAA2 248 aaPredicted RBP13.58□□□□□ -0.24
COL9A2-205ENST00000461118 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 C16orf54Q6UWD8 224 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 APRG1Q8IVJ8 170 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 THAP8Q8NA92 274 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 GLMPQ8WWB7 406 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 SMIM8Q96KF7 97 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 TRGV9Q99603 122 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
COL9A2-205ENST00000461118 PAIP2BQ9ULR5 123 aaKnown RBP13.58□□□□□ -0.24
COL9A2-205ENST00000461118 HELTA6NFD8 242 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 BUB3O43684 328 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 FABP1P07148 127 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
COL9A2-205ENST00000461118 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-205ENST00000461118 ZNF90Q03938 601 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 ZNF846Q147U1 533 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 Q6ZWC4 215 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 WFDC3Q8IUB2 231 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 WDR12Q9GZL7 423 aaKnown RBP13.57□□□□□ -0.24
COL9A2-205ENST00000461118 RABAC1Q9UI14 185 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
COL9A2-205ENST00000461118 IGKV1OR2-108A0A075B7D4 117 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 FAM240BA0A1B0GVZ2 78 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 SNRPGP15A8MWD9 76 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 K7EQG2 157 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 H2AFB2P0C5Z0 115 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 OR8G2PQ6IF36 304 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 ZBTB8BQ8NAP8 495 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-205ENST00000461118 ZNF431Q8TF32 576 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-205ENST00000461118 DCANP1Q8TF63 244 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 LINC00476Q8WZB0 136 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 TP53TG1Q9Y2A0 90 aa13.56□□□□□ -0.24
COL9A2-205ENST00000461118 H3BP45 60 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 UPK1BO75841 260 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 PAX9P55771 341 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 TAS2R30P59541 319 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 ZNF124Q15973 351 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 FAM24BQ8N5W8 94 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 STPG3Q8N7X2 389 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 PFDN2Q9UHV9 154 aa13.55□□□□□ -0.24
COL9A2-205ENST00000461118 PMS2P5A8MQ11 134 aa13.54□□□□□ -0.24
COL9A2-205ENST00000461118 SSSCA1O60232 199 aa13.54□□□□□ -0.24
COL9A2-205ENST00000461118 CFDP00746 253 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-205ENST00000461118 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-205ENST00000461118 TMEM14EPQ6UXP3 125 aa13.54□□□□□ -0.24
COL9A2-205ENST00000461118 SEC22CQ9BRL7 303 aa13.54□□□□□ -0.24
COL9A2-205ENST00000461118 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
COL9A2-205ENST00000461118 RPL35AP18077 110 aaKnown RBP13.53□□□□□ -0.24
COL9A2-205ENST00000461118 DEFB131AP59861 70 aa13.53□□□□□ -0.24
COL9A2-205ENST00000461118 C12orf45Q8N5I9 185 aaPredicted RBP13.53□□□□□ -0.24
COL9A2-205ENST00000461118 PBDC1Q9BVG4 233 aa13.53□□□□□ -0.24
COL9A2-205ENST00000461118 SPRY2O43597 315 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 TSC22D2O75157 780 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 MBPP02686 304 aaPredicted RBP13.52□□□□□ -0.25
COL9A2-205ENST00000461118 IL5P05113 134 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 IFITM3Q01628 133 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 ACOT7LQ6ZUV0 252 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 RNF183Q96D59 192 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 CSTL1Q9H114 145 aa13.52□□□□□ -0.25
COL9A2-205ENST00000461118 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.25
COL9A2-205ENST00000461118 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
COL9A2-205ENST00000461118 DNAH10Q8IVF4 4471 aa13.51□□□□□ -0.25
COL9A2-205ENST00000461118 FNDC10F2Z333 226 aa13.51□□□□□ -0.25
COL9A2-205ENST00000461118 SCGB1D2O95969 90 aa13.51□□□□□ -0.25
COL9A2-205ENST00000461118 OR2F1Q13607 317 aa13.51□□□□□ -0.25
COL9A2-205ENST00000461118 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
COL9A2-205ENST00000461118 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms