RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ARPC1AQ92747 370 aa9.81□□□□□ -0.84
CPNE6-202ENST00000460657 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
CPNE6-202ENST00000460657 PMS2P5A8MQ11 134 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 NIT1Q86X76 327 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 YLPM1P49750 1951 aaKnown RBP9.8□□□□□ -0.84
CPNE6-202ENST00000460657 IGHV3-35A0A0C4DH35 117 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 J3KRW8 73 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 TCRAP04437 139 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 PSG1P11464 419 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 NEU4Q8WWR8 484 aaPredicted RBP9.8□□□□□ -0.84
CPNE6-202ENST00000460657 TTC28Q96AY4 2481 aa9.8□□□□□ -0.84
CPNE6-202ENST00000460657 IGHV1-3A0A0C4DH29 117 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 TIMM23O14925 209 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 LINC00614P0C842 121 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRR20EP86478 221 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRR20CP86479 221 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRR20DP86480 221 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRR20BP86481 221 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRR20AP86496 221 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 IGFL3Q6UXB1 125 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 LYPD2Q6UXB3 125 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 LHFPL4Q7Z7J7 247 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 LINC00479Q96M42 142 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PMCHL2Q9BQD1 86 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 MRPL27Q9P0M9 148 aaKnown RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 POLR3KQ9Y2Y1 108 aaPredicted RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 PCNX1Q96RV3 2341 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 ZNF329Q86UD4 541 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 DCAF16Q9NXF7 216 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 SPTBN1Q01082 2364 aaKnown RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 M0QZ24 198 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 TCTAP57738 103 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 CYB5R2Q6BCY4 276 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 CHCHD1Q96BP2 118 aaKnown RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 V9GYV3 84 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 GTF3C1Q12789 2109 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 MED13Q9UHV7 2174 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 GGTLC3B5MD39 225 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 FBXL7Q9UJT9 491 aa9.79□□□□□ -0.84
CPNE6-202ENST00000460657 LSM4Q9Y4Z0 139 aaKnown RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 F11RQ9Y624 299 aaKnown RBP9.79□□□□□ -0.84
CPNE6-202ENST00000460657 A0A1W2PPI3 338 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 MMP23AO75900 390 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 DLX6P56179 175 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 TEX36Q5VZQ5 186 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 C16orf92Q96LL3 132 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 SIGLEC9Q9Y336 463 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 F5H697 171 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 IGHV3-23P01764 117 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 C5orf30Q96GV9 206 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 RNF5Q99942 180 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
CPNE6-202ENST00000460657 EML5Q05BV3 1969 aa9.78□□□□□ -0.84
CPNE6-202ENST00000460657 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
CPNE6-202ENST00000460657 CEACAM8P31997 349 aaPredicted RBP9.78□□□□□ -0.84
CPNE6-202ENST00000460657 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.84
CPNE6-202ENST00000460657 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.84
CPNE6-202ENST00000460657 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.84
CPNE6-202ENST00000460657 A0A1B0GWJ7 208 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 EREGO14944 169 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 NPPCP23582 126 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 KLRB1Q12918 225 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 IGKV3-7A0A075B6H7 116 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 CGB1A6NKQ9 187 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 NUDT3O95989 172 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 RPL15P61313 204 aaKnown RBP9.77□□□□□ -0.85
CPNE6-202ENST00000460657 ORMDL3Q8N138 153 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 UQCRFS1P47985 274 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 IGFL2Q6UWQ7 119 aa9.77□□□□□ -0.85
CPNE6-202ENST00000460657 SRRM4A7MD48 611 aaKnown RBP9.76□□□□□ -0.85
CPNE6-202ENST00000460657 CD24P25063 80 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 ZNF124Q15973 351 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 EXOC3-AS1Q8N2X6 119 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 EEF1AKMT3Q96AZ1 226 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 NBASA2RRP1 2371 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 ZNF672Q499Z4 452 aaPredicted RBP9.76□□□□□ -0.85
CPNE6-202ENST00000460657 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 A0A1W2PS18 150 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 TOMM40O96008 361 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 WNK2Q9Y3S1 2297 aa9.76□□□□□ -0.85
CPNE6-202ENST00000460657 MGPP08493 103 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms