RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 TAS2R19P59542 299 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 DEFB1P60022 68 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 MEF2DQ14814 521 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 STEAP1BQ6NZ63 245 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 NOXA1Q86UR1 476 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 SLC24A4Q8NFF2 622 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 OR51G1Q8NGK1 321 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 RBPMSQ93062 196 aaKnown RBP8.78□□□□□ -1
GPNMB-204ENST00000459927 ACY3Q96HD9 319 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 LINC00052Q96N35 136 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 CLUHP3Q96NS8 147 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 EXTL2Q9UBQ6 330 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 DKK2Q9UBU2 259 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 CACNG5Q9UF02 275 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 GPR132Q9UNW8 380 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 TMEM56-RWDD3S4R434 201 aa8.78□□□□□ -1
GPNMB-204ENST00000459927 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 IGHV3OR16-12A0A075B7B8 117 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 GSTZ1O43708 216 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-204ENST00000459927 ZNF182P17025 639 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-204ENST00000459927 KLF9Q13886 244 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-204ENST00000459927 OXA1LQ15070 435 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 RNF212Q495C1 297 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 NMSQ5H8A3 153 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 C15orf40Q8WUR7 153 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 WDR12Q9GZL7 423 aaKnown RBP8.77□□□□□ -1.01
GPNMB-204ENST00000459927 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-204ENST00000459927 NAA60Q9H7X0 242 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 RFNGQ9Y644 331 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 U3KQ87 197 aa8.77□□□□□ -1.01
GPNMB-204ENST00000459927 ABCA13Q86UQ4 5058 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 ID1P41134 155 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 FAM222AQ5U5X8 452 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 C1orf158Q8N1D5 194 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 RNF125Q96EQ8 232 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 CACFD1Q9UGQ2 172 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 PFDN2Q9UHV9 154 aa8.76□□□□□ -1.01
GPNMB-204ENST00000459927 C14orf166Q9Y224 244 aaKnown RBP8.76□□□□□ -1.01
GPNMB-204ENST00000459927 CRYM-AS1A6NIL9 109 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 GABARAPH6UMI1 98 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 GABARAPO95166 117 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 TNFAIP8O95379 198 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 GPX4P36969 197 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-204ENST00000459927 PSG9Q00887 426 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 ZNF90Q03938 601 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 GAMTQ14353 236 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 SURF2Q15527 256 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-204ENST00000459927 GSG1LQ6UXU4 331 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 UBE2DNLQ8IWF7 75 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 AP3S1Q92572 193 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 KCNIP3Q9Y2W7 256 aa8.75□□□□□ -1.01
GPNMB-204ENST00000459927 IGKV1D-37A0A075B6S9 117 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SNRPGP15A8MWD9 76 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 DISC1C4P0D8 188 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SOCS3O14543 225 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SULT1A3P0DMM9 295 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SULT1A4P0DMN0 295 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 ATP5IP56385 69 aaPredicted RBP8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SSBP1Q04837 148 aaKnown RBP8.74□□□□□ -1.01
GPNMB-204ENST00000459927 ZNF79Q15937 498 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 CTF1Q16619 201 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SOHLH1Q5JUK2 328 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 GPR107Q5VW38 600 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SPATA31B1PQ5VZV4 182 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 OR8G2PQ6IF36 304 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 FAAP20Q6NZ36 180 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
GPNMB-204ENST00000459927 SLC35B3Q9H1N7 401 aa8.74□□□□□ -1.01
GPNMB-204ENST00000459927 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-204ENST00000459927 PSMB3P49720 205 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 CCR6P51684 374 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 PAX9P55771 341 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 EBLN2Q6P2I7 272 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 ZNF575Q86XF7 245 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 LGI3Q8N145 548 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 IL22RA2Q969J5 263 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 MIXL1Q9H2W2 232 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 RBKSQ9H477 322 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 HSPB7Q9UBY9 170 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 GOLT1BQ9Y3E0 138 aa8.73□□□□□ -1.01
GPNMB-204ENST00000459927 YTHDF2Q9Y5A9 579 aaKnown RBP8.73□□□□□ -1.01
GPNMB-204ENST00000459927 A0A0J9YX75 114 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 F6UB75 175 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 CTDSP2O14595 271 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 HBE1P02100 147 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 HTN3P15516 51 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 SUPT4H1P63272 117 aaKnown RBP8.72□□□□□ -1.01
GPNMB-204ENST00000459927 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms