RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 TBR1Q16650 682 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 ETFRF1Q6IPR1 90 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 C20orf144Q9BQM9 153 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 ATG101Q9BSB4 218 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 NRN1Q9NPD7 142 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 ZNF331Q9NQX6 463 aaPredicted RBP16.52■□□□□ 0.23
CRAT-207ENST00000458362 SIGLEC9Q9Y336 463 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 PAM16Q9Y3D7 125 aa16.52■□□□□ 0.23
CRAT-207ENST00000458362 PTPRZ1P23471 2315 aaPredicted RBP16.51■□□□□ 0.23
CRAT-207ENST00000458362 IGLV1-47P01700 117 aa16.51■□□□□ 0.23
CRAT-207ENST00000458362 SLC25A5P05141 298 aaKnown RBP16.51■□□□□ 0.23
CRAT-207ENST00000458362 PMCHP20382 165 aa16.51■□□□□ 0.23
CRAT-207ENST00000458362 TMEM183BQ1AE95 376 aa16.51■□□□□ 0.23
CRAT-207ENST00000458362 NUP35Q8NFH5 326 aa16.51■□□□□ 0.23
CRAT-207ENST00000458362 NGBQ9NPG2 151 aa16.51■□□□□ 0.23
CRAT-207ENST00000458362 PGPA6NDG6 321 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 RAB4AP20338 218 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 AMTP48728 403 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 NUTF2P61970 127 aaKnown RBP16.5■□□□□ 0.23
CRAT-207ENST00000458362 WIPF2Q8TF74 440 aaPredicted RBP16.5■□□□□ 0.23
CRAT-207ENST00000458362 RPH3ALQ9UNE2 315 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 H3BTX0 84 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 M0R143 59 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 FAM87AP0C7U9 286 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 APOBEC3AP31941 199 aaPredicted RBP16.5■□□□□ 0.23
CRAT-207ENST00000458362 LEMD1Q68G75 181 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 ZNF705AQ6ZN79 300 aaPredicted RBP16.5■□□□□ 0.23
CRAT-207ENST00000458362 ZNF586Q9NXT0 402 aa16.5■□□□□ 0.23
CRAT-207ENST00000458362 RALYQ9UKM9 306 aaKnown RBP16.5■□□□□ 0.23
CRAT-207ENST00000458362 IGHV1-3A0A0C4DH29 117 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 TMEM116Q8NCL8 245 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 TMEM68Q96MH6 324 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.49■□□□□ 0.23
CRAT-207ENST00000458362 TEX22C9J3V5 150 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 NBEAP1P0C6P0 100 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 VAMP8Q9BV40 100 aa16.49■□□□□ 0.23
CRAT-207ENST00000458362 VWC2LB2RUY7 222 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 BUB1B-PAK6H3BSN5 160 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 HYPMO75409 117 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 GP9P14770 177 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 CASP6P55212 293 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 UBE2G1P62253 170 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 NIT1Q86X76 327 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 STXBP6Q8NFX7 210 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 TSKUQ8WUA8 353 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 KLF12Q9Y4X4 402 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 INSIG2Q9Y5U4 225 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 TLN1Q9Y490 2541 aaKnown RBP16.48■□□□□ 0.23
CRAT-207ENST00000458362 ZNF324O75467 553 aaPredicted RBP16.48■□□□□ 0.23
CRAT-207ENST00000458362 COX7A1P24310 79 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 PRRX1P54821 245 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 FAM19A2Q8N3H0 131 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 C18orf32Q8TCD1 76 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 TNFRSF14Q92956 283 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 NEU1Q99519 415 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 MIEN1Q9BRT3 115 aa16.48■□□□□ 0.23
CRAT-207ENST00000458362 B9A039 149 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 DIRC3C9JPN6 131 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 LINC00322Q6ZN03 302 aaPredicted RBP16.47■□□□□ 0.23
CRAT-207ENST00000458362 SPACA3Q8IXA5 215 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 FBXL15Q9H469 300 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 CD3EP07766 207 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 PRR31Q5SQ13 230 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 RASL11AQ6T310 242 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 C22orf15Q8WYQ4 148 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 CLEC7AQ9BXN2 247 aa16.47■□□□□ 0.23
CRAT-207ENST00000458362 F11RQ9Y624 299 aaKnown RBP16.47■□□□□ 0.23
CRAT-207ENST00000458362 HIGD1CA8MV81 97 aa16.46■□□□□ 0.23
CRAT-207ENST00000458362 TCAPO15273 167 aa16.46■□□□□ 0.23
CRAT-207ENST00000458362 PPP1R27Q86WC6 154 aa16.46■□□□□ 0.23
CRAT-207ENST00000458362 SSBP4Q9BWG4 385 aaPredicted RBP16.46■□□□□ 0.23
CRAT-207ENST00000458362 LINC01560Q8TB33 94 aa16.45■□□□□ 0.22
CRAT-207ENST00000458362 MLST8Q9BVC4 326 aa16.45■□□□□ 0.22
CRAT-207ENST00000458362 HIST1H1EP10412 219 aaKnown RBP16.45■□□□□ 0.22
CRAT-207ENST00000458362 GPR6P46095 362 aaPredicted RBP16.45■□□□□ 0.22
CRAT-207ENST00000458362 CEP295Q9C0D2 2601 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 PLP1P60201 277 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 TCF24Q7RTU0 167 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 C8orf46Q8TAG6 207 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 GPR82Q96P67 336 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 Q9H3A6 140 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 C3orf79P0CE67 100 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 PAX2Q02962 417 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 ABCA1O95477 2261 aa16.44■□□□□ 0.22
CRAT-207ENST00000458362 PPIAL4CA0A0B4J2A2 164 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 PPIAL4GP0DN37 164 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 NTF3P20783 257 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 CAMPP49913 170 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 C5orf17Q8NAS9 161 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 CHRDL1Q9BU40 450 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 A0A1B0GXF2 115 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 SIAH2O43255 324 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 TOMM40O96008 361 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 IGLC1P0CG04 106 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 PSG1P11464 419 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 LYZP61626 148 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 LDLRAD2Q5SZI1 272 aa16.43■□□□□ 0.22
CRAT-207ENST00000458362 SRSF12Q8WXF0 261 aaKnown RBP16.43■□□□□ 0.22
CRAT-207ENST00000458362 MRPL27Q9P0M9 148 aaKnown RBP16.43■□□□□ 0.22
CRAT-207ENST00000458362 TCRAP04437 139 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms