RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
SMPD4-215ENST00000457039 VWC2Q2TAL6 325 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 STX12Q86Y82 276 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 TMEM217Q8N7C4 229 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 ASB13Q8WXK3 278 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 PRR25Q96S07 402 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 MBD2Q9UBB5 411 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
SMPD4-215ENST00000457039 SELENOKQ9Y6D0 94 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 U3KQE9 123 aa10.65□□□□□ -0.7
SMPD4-215ENST00000457039 IGHV3-49A0A0A0MS15 119 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 SMCO3A2RU48 225 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 ZNF785A8K8V0 405 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 K7EIL1 84 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 FABP1P07148 127 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-215ENST00000457039 S100A11P31949 105 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 TMEM182Q6ZP80 229 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-215ENST00000457039 OR51G1Q8NGK1 321 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 RNF125Q96EQ8 232 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
SMPD4-215ENST00000457039 IGHV3OR16-13A0A075B7E8 117 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 IGHV3-74A0A0B4J1X5 117 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 NPPCP23582 126 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 NHLH2Q02577 135 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 BAXQ07812 192 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 OR2F1Q13607 317 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 TEPPQ6URK8 271 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 ST8SIA2Q92186 375 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 METTL26Q96S19 204 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 RNF2Q99496 336 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 SLC25A31Q9H0C2 315 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 SORL1Q92673 2214 aa10.63□□□□□ -0.71
SMPD4-215ENST00000457039 CFDP00746 253 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-215ENST00000457039 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMPD4-215ENST00000457039 GATA2P23769 480 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-215ENST00000457039 RAP2BP61225 183 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 HBG1P69891 147 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 HBG2P69892 147 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 ATP6V1FQ16864 119 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 Q5BKY6 102 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 Q6ZNX1 250 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 TMEM147Q9BVK8 224 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
SMPD4-215ENST00000457039 G3V3Q6 166 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 TSPAN4O14817 238 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 THAP6Q8TBB0 222 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 MGST2Q99735 147 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
SMPD4-215ENST00000457039 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 A0A1W2PS18 150 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 AGPAT2O15120 278 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 BUB3O43684 328 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
SMPD4-215ENST00000457039 BMI1P35226 326 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 EIF2B2P49770 351 aaKnown RBP10.6□□□□□ -0.71
SMPD4-215ENST00000457039 PLP1P60201 277 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 LYZP61626 148 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 SELENOTP62341 195 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 FGL1Q08830 312 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 RBPMS2Q6ZRY4 209 aaKnown RBP10.6□□□□□ -0.71
SMPD4-215ENST00000457039 Q8N1Y9 231 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 BPIFCQ8NFQ6 507 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-215ENST00000457039 PBDC1Q9BVG4 233 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 SLC45A2Q9UMX9 530 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
SMPD4-215ENST00000457039 DNAH9Q9NYC9 4486 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 DFFBO76075 338 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 CD5P06127 495 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 GUCA2BQ16661 112 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 TCF24Q7RTU0 167 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 ZNF546Q86UE3 836 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
SMPD4-215ENST00000457039 LINC00869P0C866 280 aa10.58□□□□□ -0.72
SMPD4-215ENST00000457039 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
SMPD4-215ENST00000457039 NARS2Q96I59 477 aaKnown RBP10.58□□□□□ -0.72
SMPD4-215ENST00000457039 GGTLC1Q9BX51 225 aa10.58□□□□□ -0.72
SMPD4-215ENST00000457039 CD7P09564 240 aa10.57□□□□□ -0.72
SMPD4-215ENST00000457039 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-215ENST00000457039 CAMLGP49069 296 aa10.57□□□□□ -0.72
SMPD4-215ENST00000457039 PRR20EP86478 221 aa10.57□□□□□ -0.72
SMPD4-215ENST00000457039 PRR20CP86479 221 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms