RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LINC00312Q9Y6C7 94 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 UPK2O00526 184 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 HYPMO75409 117 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 RNASE2P10153 161 aaKnown RBP9.99□□□□□ -0.81
LINC00959-201ENST00000456581 CAMPP49913 170 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 Q0VG73 95 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 SLC25A48Q6ZT89 311 aaKnown RBP9.99□□□□□ -0.81
LINC00959-201ENST00000456581 RITA1Q96K30 269 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 GNB1LQ9BYB4 327 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 DNAJC4Q9NNZ3 241 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 TNFRSF13BO14836 293 aaPredicted RBP9.99□□□□□ -0.81
LINC00959-201ENST00000456581 ESDP10768 282 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF841Q6ZN19 808 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 MUC15Q8N387 334 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 TSKUQ8WUA8 353 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF714Q96N38 554 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
LINC00959-201ENST00000456581 FNDC4Q9H6D8 234 aaPredicted RBP9.99□□□□□ -0.81
LINC00959-201ENST00000456581 ISLRO14498 428 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 NDUFB3O43676 98 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
LINC00959-201ENST00000456581 LOXP28300 417 aaPredicted RBP9.98□□□□□ -0.81
LINC00959-201ENST00000456581 TNXAQ16473 311 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
LINC00959-201ENST00000456581 BLNKQ8WV28 456 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 HARBI1Q96MB7 349 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 IGHV3-72A0A0B4J1Y9 119 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 MOSP00540 346 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 Q6ZN92 141 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 ZC2HC1AQ96GY0 325 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 GAL3ST2Q9H3Q3 398 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 LINC00574Q9H8X3 128 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF586Q9NXT0 402 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 CLEC5AQ9NY25 188 aa9.98□□□□□ -0.81
LINC00959-201ENST00000456581 TOX4O94842 621 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 MFAP2P55001 183 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 WT1-ASQ06250 92 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 PATE2Q6UY27 113 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 TMEM167BQ9NRX6 74 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 CCL25O15444 150 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
LINC00959-201ENST00000456581 OR5G3P0C626 314 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 PPOXP50336 477 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 FOXE3Q13461 319 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 LRRC10Q5BKY1 277 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
LINC00959-201ENST00000456581 ADTRPQ96IZ2 230 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
LINC00959-201ENST00000456581 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 APCSP02743 223 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 AMY1AP04745 511 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 GAGE1Q13065 139 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 Q56UQ5 140 aa9.97□□□□□ -0.81
LINC00959-201ENST00000456581 CELSR2Q9HCU4 2923 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 SMIM27A0A1W2PRY6 76 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 CGB1A6NKQ9 187 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 B9A039 149 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 PCP4P48539 62 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 MEF2CQ06413 473 aaPredicted RBP9.96□□□□□ -0.81
LINC00959-201ENST00000456581 CD69Q07108 199 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 RTL8BQ17RB0 113 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 HCP5Q6MZN7 132 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 IGFBPL1Q8WX77 278 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 TXN2Q99757 166 aa9.96□□□□□ -0.81
LINC00959-201ENST00000456581 PSMB11A5LHX3 300 aa9.96□□□□□ -0.82
LINC00959-201ENST00000456581 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
LINC00959-201ENST00000456581 LINC00322Q6ZN03 302 aaPredicted RBP9.96□□□□□ -0.82
LINC00959-201ENST00000456581 OR10X1Q8NGY0 326 aa9.96□□□□□ -0.82
LINC00959-201ENST00000456581 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
LINC00959-201ENST00000456581 OSTCQ9NRP0 149 aa9.96□□□□□ -0.82
LINC00959-201ENST00000456581 AMMECR1Q9Y4X0 333 aaPredicted RBP9.96□□□□□ -0.82
LINC00959-201ENST00000456581 ORM2P19652 201 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 UQCRFS1P47985 274 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 TCF24Q7RTU0 167 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 NUP35Q8NFH5 326 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 SLC35E1Q96K37 410 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 ZNF138P52744 262 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 FBXL19-AS1Q494R0 122 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 ZNF672Q499Z4 452 aaPredicted RBP9.95□□□□□ -0.82
LINC00959-201ENST00000456581 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
LINC00959-201ENST00000456581 SSX8Q7RTT4 187 aa9.95□□□□□ -0.82
LINC00959-201ENST00000456581 NUDT10Q8NFP7 164 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms