RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
SCN5A-210ENST00000455624 A0A1B0GTI1 187 aa8.35□□□□□ -1.07
SCN5A-210ENST00000455624 RPL32P62910 135 aaKnown RBP8.35□□□□□ -1.07
SCN5A-210ENST00000455624 ZFP36L1Q07352 338 aaKnown RBP8.35□□□□□ -1.07
SCN5A-210ENST00000455624 SRSF4Q08170 494 aaKnown RBP8.35□□□□□ -1.07
SCN5A-210ENST00000455624 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
SCN5A-210ENST00000455624 Q9UFV3 132 aa8.35□□□□□ -1.07
SCN5A-210ENST00000455624 VWC2LB2RUY7 222 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 SH2D1AO60880 128 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 GZMBP10144 247 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
SCN5A-210ENST00000455624 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 TEX38Q6PEX7 206 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 RALGAPA2Q2PPJ7 1873 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 IGLV3-32A0A0A0MS00 114 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 C1QTNF4Q9BXJ3 329 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 PLSCR4Q9NRQ2 329 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 HEATR1Q9H583 2144 aaKnown RBP8.34□□□□□ -1.07
SCN5A-210ENST00000455624 IGLV3-12A0A075B6K2 115 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 A0A1W2PRE2 83 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 NPIPB5A8MRT5 1133 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 LEPROTO15243 131 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 FCN3O75636 299 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 TRPM6Q9BX84 2022 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 PRRC2BQ5JSZ5 2229 aaKnown RBP8.34□□□□□ -1.07
SCN5A-210ENST00000455624 OVOL2Q9BRP0 275 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 GSN-AS1Q9NRJ2 163 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 ATG2BQ96BY7 2078 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 EREGO14944 169 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 SCRT1Q9BWW7 348 aa8.34□□□□□ -1.07
SCN5A-210ENST00000455624 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
SCN5A-210ENST00000455624 ZNF562Q6V9R5 426 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 ORAOV1Q8WV07 137 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 USMG5Q96IX5 58 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 FGFBP3Q8TAT2 258 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 ITGB1BP1O14713 200 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
SCN5A-210ENST00000455624 Q0VFX4 171 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 HAPLN4Q86UW8 402 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 A8MWV9 139 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 LOC285556D6RIA3 1793 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 LAIR2Q6ISS4 152 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 A0A0A6YYD4 124 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
SCN5A-210ENST00000455624 GAFA1Q96PS6 74 aa8.33□□□□□ -1.08
SCN5A-210ENST00000455624 OOSP1A8MZH6 123 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 BUB1B-PAK6H3BSN5 160 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 NTN3O00634 580 aaPredicted RBP8.32□□□□□ -1.08
SCN5A-210ENST00000455624 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 SMPXQ9UHP9 88 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 SLC25A48Q6ZT89 311 aaKnown RBP8.32□□□□□ -1.08
SCN5A-210ENST00000455624 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 EDA2RQ9HAV5 297 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 PCM1Q15154 2024 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 NCR2O95944 276 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 CD177Q8N6Q3 437 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 LINC00477Q96M19 166 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 SCN2AQ99250 2005 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 PRDM13Q9H4Q3 707 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 TRAV9-2A0A087WT02 112 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 D6R8Y8 96 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 C6orf226Q5I0X4 101 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 LYZL1Q6UWQ5 148 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 VWCEQ96DN2 955 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 RNF5Q99942 180 aa8.32□□□□□ -1.08
SCN5A-210ENST00000455624 ZNF138P52744 262 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 VSIRQ9H7M9 311 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
SCN5A-210ENST00000455624 LINC01619G3V211 115 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 PCP4P48539 62 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 C9orf139Q6ZV77 190 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 TRGV9Q99603 122 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 TCRAP04437 139 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 PSG3Q16557 428 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 OCC1Q8TAD7 63 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 H0YJW9 148 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 PSG1P11464 419 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 SAMD5Q5TGI4 173 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 E9PQ18 207 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 CGB3P0DN86 165 aa8.31□□□□□ -1.08
SCN5A-210ENST00000455624 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
SCN5A-210ENST00000455624 HSD52Q0P140 79 aa8.3□□□□□ -1.08
SCN5A-210ENST00000455624 ZFC3H1O60293 1989 aaKnown RBP8.3□□□□□ -1.08
SCN5A-210ENST00000455624 POLR2AP24928 1970 aaKnown RBP8.3□□□□□ -1.08
SCN5A-210ENST00000455624 RNF222A6NCQ9 220 aa8.3□□□□□ -1.08
SCN5A-210ENST00000455624 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
SCN5A-210ENST00000455624 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms