RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 THAP8Q8NA92 274 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 ENKURQ8TC29 256 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 SLC35E1Q96K37 410 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 METTL26Q96S19 204 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 RETNQ9HD89 108 aa8.4□□□□□ -1.06
HDAC9-217ENST00000455069 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 IL5P05113 134 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 RD3LP0DJH9 198 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 P2RY1P47900 373 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 TFPI2P48307 235 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-217ENST00000455069 ZNF124Q15973 351 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 TMEM14EPQ6UXP3 125 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 ACOT7LQ6ZUV0 252 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 FAM24BQ8N5W8 94 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 Q8WTZ3 238 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 C11orf1Q9H5F2 150 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 PSENENQ9NZ42 101 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
HDAC9-217ENST00000455069 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
HDAC9-217ENST00000455069 DNAH7Q8WXX0 4024 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 ZFP92A6NM28 416 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 J3QL48 77 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 HNRNPCP07910 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-217ENST00000455069 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
HDAC9-217ENST00000455069 IL15RAQ13261 267 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 STPG3Q8N7X2 389 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 RNF125Q96EQ8 232 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 TRGV9Q99603 122 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
HDAC9-217ENST00000455069 A0A1W2PS18 150 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 C7orf66A4D0T2 115 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 FAM25EA8MYX2 175 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 K7EPK0 472 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 TSC22D2O75157 780 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 BMI1P35226 326 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 ARL16Q0P5N6 197 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 OR2F1Q13607 317 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 TMEM182Q6ZP80 229 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-217ENST00000455069 WFDC3Q8IUB2 231 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 RAB40CQ96S21 281 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 SPATA25Q9BR10 227 aa8.37□□□□□ -1.07
HDAC9-217ENST00000455069 TRAV2A0A0B4J234 112 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 K7EQG2 157 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 BUB3O43684 328 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 CD5P06127 495 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-217ENST00000455069 TAS2R30P59541 319 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 DCANP1Q8TF63 244 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 MARVELD1Q9BSK0 173 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 PBDC1Q9BVG4 233 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 GGTLC1Q9BX51 225 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 TMEM231Q9H6L2 316 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 RABAC1Q9UI14 185 aa8.36□□□□□ -1.07
HDAC9-217ENST00000455069 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
HDAC9-217ENST00000455069 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
HDAC9-217ENST00000455069 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-217ENST00000455069 INMT-MINDY4F8WBC2 141 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 EIF2B2P49770 351 aaKnown RBP8.35□□□□□ -1.07
HDAC9-217ENST00000455069 LYZP61626 148 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 RRAS2P62070 204 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-217ENST00000455069 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
HDAC9-217ENST00000455069 DLK1P80370 383 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 RAB32Q13637 225 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 GSG1LQ6UXU4 331 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 STXBP6Q8NFX7 210 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
HDAC9-217ENST00000455069 EDA2RQ9HAV5 297 aa8.35□□□□□ -1.07
HDAC9-217ENST00000455069 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 C3orf84H3BNL1 204 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 DNASE2O00115 360 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-217ENST00000455069 PRAF2O60831 178 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 SIX6O95475 246 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
HDAC9-217ENST00000455069 DEFA1P59665 94 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 DEFA3P59666 94 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 DEFB131AP59861 70 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 PAFAH1B2P68402 229 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 LEMD1Q68G75 181 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 GRAMD2BQ96HH9 432 aa8.34□□□□□ -1.07
HDAC9-217ENST00000455069 GPN1Q9HCN4 374 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-217ENST00000455069 SMCO3A2RU48 225 aa8.33□□□□□ -1.08
HDAC9-217ENST00000455069 FAM24AA6NFZ4 105 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms