RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TRGV9Q99603 122 aa10.84□□□□□ -0.67
CLK3-203ENST00000454830 DMRT1Q9Y5R6 373 aa10.84□□□□□ -0.67
CLK3-203ENST00000454830 IGHV3OR16-8A0A075B7F1 116 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 OVOL3O00110 214 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 NPFFO15130 113 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 NDPQ00604 133 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 PRR27Q6MZM9 219 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 MALSU1Q96EH3 234 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 TMEM242Q9NWH2 141 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
CLK3-203ENST00000454830 SPINK4O60575 86 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 UNQ5815/PRO19632Q6UWF5 114 aa10.83□□□□□ -0.68
CLK3-203ENST00000454830 IGHV4-30-2A0A087WSY4 118 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 S100A9P06702 114 aaKnown RBP10.82□□□□□ -0.68
CLK3-203ENST00000454830 COX6B1P14854 86 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 GNG5P63218 68 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 ZNF562Q6V9R5 426 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 FAM167A-AS1Q96KT0 104 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 AP4M1O00189 453 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 IL4P05112 153 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 CNN1P51911 297 aaKnown RBP10.82□□□□□ -0.68
CLK3-203ENST00000454830 NPBQ8NG41 125 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 OOSP1A8MZH6 123 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 LY6EQ16553 131 aa10.82□□□□□ -0.68
CLK3-203ENST00000454830 FABP1P07148 127 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 CRYGCP07315 174 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 IGLC1P0CG04 106 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 A0A1W2PRE2 83 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 I3L2K1 104 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 NDUFA3O95167 84 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 TCL1AP56279 114 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 UBE2G1P62253 170 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 ASPHD1Q5U4P2 390 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 YPEL4Q96NS1 127 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 MS4A10Q96PG2 267 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 C7orf69Q9H7B7 122 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 THYN1Q9P016 225 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 TBL2Q9Y4P3 447 aaKnown RBP10.81□□□□□ -0.68
CLK3-203ENST00000454830 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 C1QL4Q86Z23 238 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 CSMD1Q96PZ7 3565 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 CREBBPQ92793 2442 aa10.81□□□□□ -0.68
CLK3-203ENST00000454830 K7EIM0 57 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 TRGC1P0CF51 173 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 PFN1P07737 140 aaKnown RBP10.8□□□□□ -0.68
CLK3-203ENST00000454830 COL8A1P27658 744 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
CLK3-203ENST00000454830 MFAP4P55083 255 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 OR1L6Q8NGR2 347 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 DOPEY2Q9Y3R5 2298 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 PSMB11A5LHX3 300 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 PAX2Q02962 417 aa10.8□□□□□ -0.68
CLK3-203ENST00000454830 RNASE7Q9H1E1 156 aaKnown RBP10.8□□□□□ -0.68
CLK3-203ENST00000454830 S100A2P29034 98 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 SLC35B1P78383 322 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 C10orf105Q8TEF2 133 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 TRBV24-1A0A075B6N3 115 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
CLK3-203ENST00000454830 CMTM2Q8TAZ6 248 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 HSPB9Q9BQS6 159 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 IGKV1-17P01599 117 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 RAB4BP61018 213 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 BAGE2Q86Y30 109 aa10.79□□□□□ -0.68
CLK3-203ENST00000454830 ABCA2Q9BZC7 2435 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 K7EN84 100 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 NDUFB8O95169 186 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 Q8N9W7 124 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 FXYD5Q96DB9 178 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 C12orf57Q99622 126 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 SLC25A39Q9BZJ4 359 aaPredicted RBP10.78□□□□□ -0.68
CLK3-203ENST00000454830 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 G3V318 75 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
CLK3-203ENST00000454830 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
CLK3-203ENST00000454830 PEX7O00628 323 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms