RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 TOMM20LQ6UXN7 152 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 BAGE2Q86Y30 109 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 OR8I2Q8N0Y5 310 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 ZCCHC24Q8N2G6 241 aaKnown RBP8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 PAXXQ9BUH6 204 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 SLC25A2Q9BXI2 301 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
GTF3C2-206ENST00000454704 M0R143 59 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 SLC17A3O00476 420 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 PEX7O00628 323 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 HIST1H1EP10412 219 aaKnown RBP8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 RAB4AP20338 218 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 IER3P46695 156 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 DLX6P56179 175 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 CT83Q5H943 113 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 UTF1Q5T230 341 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 C19orf35Q6ZS72 473 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 TMEM256Q8N2U0 113 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 OR4B1Q8NGF8 309 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 RNASE6Q93091 150 aaKnown RBP8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 GRAMD2BQ96HH9 432 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 SAMD10Q9BYL1 202 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
GTF3C2-206ENST00000454704 A6NNC1 897 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF705FA8MVS1 300 aaPredicted RBP8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 SERF1AO75920 110 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF705DP0CH99 300 aaPredicted RBP8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF705BP0CI00 300 aaPredicted RBP8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 MYOD1P15172 320 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 PRRX1P54821 245 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 CCL8P80075 99 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 BSPH1Q075Z2 132 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 USF2Q15853 346 aaPredicted RBP8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 WFDC8Q8IUA0 241 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 SIGLECL1Q8N7X8 197 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 MBD6Q96DN6 1003 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 KCNS1Q96KK3 526 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 TBX15Q96SF7 602 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF355PQ9NSJ1 428 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 TP53TG3Q9ULZ0 132 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
GTF3C2-206ENST00000454704 FAM231BA6NCW3 169 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 B9A039 149 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 C22orf46C9J442 243 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 CCL3L1P16619 93 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 HNF1AP20823 631 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 LOXP28300 417 aaPredicted RBP8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 MYCNOSP40205 109 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 WT1-ASQ06250 92 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 TMEM116Q8NCL8 245 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 H1FXQ92522 213 aaKnown RBP8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 DYNLRB1Q9NP97 96 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF492Q9P255 531 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 RNF24Q9Y225 148 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 KLF12Q9Y4X4 402 aa8.5□□□□□ -1.05
GTF3C2-206ENST00000454704 FN1P02751 2386 aaKnown RBP8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 OR2J3O76001 311 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 GPX1P07203 203 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 THBDP07204 575 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 APOBEC3AP31941 199 aaPredicted RBP8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 UBE2G1P62253 170 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 OR5I1Q13606 314 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 TPTE2P1Q5T6R2 138 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 Q71RC1 249 aaPredicted RBP8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 S100A7AQ86SG5 101 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 WFDC11Q8NEX6 87 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 OR10W1Q8NGF6 305 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 NPIPB3Q92617 1050 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 VAMP8Q9BV40 100 aa8.49□□□□□ -1.05
GTF3C2-206ENST00000454704 TLN2Q9Y4G6 2542 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 A0A1W2PPI3 338 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 GRIFINA4D1Z8 144 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 ZNF253O75346 499 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 APCSP02743 223 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 CRYGBP07316 175 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 MGST1P10620 155 aaKnown RBP8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 FOSL1P15407 271 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 LINC00310P59036 64 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 KLF5Q13887 457 aaPredicted RBP8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 PRSS8Q16651 343 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 Q6ZWC4 215 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 MOB3BQ86TA1 216 aa8.48□□□□□ -1.05
GTF3C2-206ENST00000454704 C5orf17Q8NAS9 161 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms