RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
SMPD4-213ENST00000454468 Q56UQ5 140 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 ELOA3CA0A087WX78 387 aaPredicted RBP9.67□□□□□ -0.86
SMPD4-213ENST00000454468 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 VENTXO95231 258 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 MFAP2P55001 183 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 TOMM20LQ6UXN7 152 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 SMIM15Q7Z3B0 74 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 CENPVQ7Z7K6 275 aaPredicted RBP9.67□□□□□ -0.86
SMPD4-213ENST00000454468 RASL11BQ9BPW5 248 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 HTR1DP28221 377 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 OR1L4Q8NGR5 311 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 PTPRBP23467 1997 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 SH2D7A6NKC9 451 aaPredicted RBP9.66□□□□□ -0.86
SMPD4-213ENST00000454468 HYPMO75409 117 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 ADMP35318 185 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
SMPD4-213ENST00000454468 KLRB1Q12918 225 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 OR2D3Q8NGH3 330 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF253O75346 499 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 AMBPP02760 352 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 VWC2Q2TAL6 325 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 OR5AN1Q8NGI8 311 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 SRSF12Q8WXF0 261 aaKnown RBP9.65□□□□□ -0.86
SMPD4-213ENST00000454468 NDUFA4L2Q9NRX3 87 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF257Q9Y2Q1 563 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM155Q4W5P6 130 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 C2orf83Q53S99 150 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF833PQ6ZTB9 187 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM183AQ8IXX5 376 aa9.65□□□□□ -0.86
SMPD4-213ENST00000454468 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
SMPD4-213ENST00000454468 SONP18583 2426 aaKnown RBP9.65□□□□□ -0.86
SMPD4-213ENST00000454468 TRAV8-1A0A0A6YYK1 113 aa9.65□□□□□ -0.87
SMPD4-213ENST00000454468 LIPFP07098 398 aa9.65□□□□□ -0.87
SMPD4-213ENST00000454468 ECSCRQ19T08 205 aa9.65□□□□□ -0.87
SMPD4-213ENST00000454468 WNT10AQ9GZT5 417 aa9.65□□□□□ -0.87
SMPD4-213ENST00000454468 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.87
SMPD4-213ENST00000454468 LOC105371242A0A075B767 164 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 GNG7O60262 68 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 FCN3O75636 299 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 PAX5Q02548 391 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 Q8N7P7 452 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 ZNF596Q8TC21 504 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
SMPD4-213ENST00000454468 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 K7EN84 100 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 LGALS7P47929 136 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 AMTP48728 403 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 RNASE8Q8TDE3 154 aaKnown RBP9.64□□□□□ -0.87
SMPD4-213ENST00000454468 NBEAP1P0C6P0 100 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 FCGR2BP31994 310 aaPredicted RBP9.64□□□□□ -0.87
SMPD4-213ENST00000454468 CR1LQ2VPA4 569 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 TMEM167AQ8TBQ9 72 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 PERPQ96FX8 193 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 HSPB9Q9BQS6 159 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
SMPD4-213ENST00000454468 ISLRO14498 428 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 C1orf159Q96HA4 380 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 C22orf46C9J442 243 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 BUB1B-PAK6H3BSN5 160 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 CSN3P07498 182 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 CA7P43166 264 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PRR20EP86478 221 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PRR20CP86479 221 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PRR20DP86480 221 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PRR20BP86481 221 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PRR20AP86496 221 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 SIGLECL1Q8N7X8 197 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 RAI1Q7Z5J4 1906 aaPredicted RBP9.63□□□□□ -0.87
SMPD4-213ENST00000454468 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 IL4P05112 153 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 LINC00614P0C842 121 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 EXOC3-AS1Q8N2X6 119 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 YPEL4Q96NS1 127 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 LINC00527Q9UJ94 153 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
SMPD4-213ENST00000454468 TCRBV4S1A1TA0A5B7 111 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 SRIP30626 198 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
SMPD4-213ENST00000454468 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 ITGB1BP1O14713 200 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms