RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
RFTN1-207ENST00000453536 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
RFTN1-207ENST00000453536 GGNBP1Q5YKI7 109 aa10.24□□□□□ -0.77
RFTN1-207ENST00000453536 Q8WTZ3 238 aa10.24□□□□□ -0.77
RFTN1-207ENST00000453536 WDR12Q9GZL7 423 aaKnown RBP10.24□□□□□ -0.77
RFTN1-207ENST00000453536 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 PRSS46E5RG02 174 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 WRBO00258 174 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 BUB3O43684 328 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 DEDDO75618 318 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 JTBO76095 146 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 ANXA7P20073 488 aaKnown RBP10.23□□□□□ -0.77
RFTN1-207ENST00000453536 S100A5P33763 92 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 FXYD7P58549 80 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 LYZP61626 148 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 TMEM128Q5BJH2 165 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
RFTN1-207ENST00000453536 RPP25LQ8N5L8 163 aaKnown RBP10.23□□□□□ -0.77
RFTN1-207ENST00000453536 RNF125Q96EQ8 232 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 C17orf77Q96MU5 243 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 SCGB3A2Q96PL1 93 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
RFTN1-207ENST00000453536 TRAV30A0A087WSZ9 112 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 FAUP35544 74 aaKnown RBP10.22□□□□□ -0.77
RFTN1-207ENST00000453536 ZNF767PQ75MW2 155 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 STHQ8IWL8 128 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 CENPSQ8N2Z9 138 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 Q8NAQ8 132 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 PHLDA1Q8WV24 401 aaPredicted RBP10.22□□□□□ -0.77
RFTN1-207ENST00000453536 RAB40CQ96S21 281 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 U3KQ87 197 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 X6R8D5 127 aa10.22□□□□□ -0.77
RFTN1-207ENST00000453536 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
RFTN1-207ENST00000453536 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 A0A1W2PS18 150 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 ZFP92A6NM28 416 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 IGKV3-20P01619 116 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 ANXA3P12429 323 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 SIGLEC15Q6ZMC9 328 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 LRTM2Q8N967 370 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
RFTN1-207ENST00000453536 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 HELTA6NFD8 242 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 F6UB75 175 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 AP3S2P59780 193 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
RFTN1-207ENST00000453536 SRPXP78539 464 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 IGFL4Q6B9Z1 124 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 SLC35E1Q96K37 410 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
RFTN1-207ENST00000453536 DNAH2Q9P225 4427 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 CCSO14618 274 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 SYNGR2O43760 224 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 NDUFB6O95139 128 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 PRR20EP86478 221 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 PRR20CP86479 221 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 PRR20DP86480 221 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 PRR20BP86481 221 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 PRR20AP86496 221 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 SPANXN5Q5MJ07 72 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 SPANXN2Q5MJ10 180 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 ETFRF1Q6IPR1 90 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 GATAD1Q8WUU5 269 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
RFTN1-207ENST00000453536 NUPR2A6NF83 97 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 SOCS3O14543 225 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 PLA2G10O15496 165 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 IL7P13232 177 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 EIF2B2P49770 351 aaKnown RBP10.18□□□□□ -0.78
RFTN1-207ENST00000453536 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
RFTN1-207ENST00000453536 TRIQKQ629K1 86 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
RFTN1-207ENST00000453536 SLC25A21Q9BQT8 299 aaPredicted RBP10.18□□□□□ -0.78
RFTN1-207ENST00000453536 C11orf68Q9H3H3 251 aaKnown RBP10.18□□□□□ -0.78
RFTN1-207ENST00000453536 NRN1Q9NPD7 142 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 DOK5Q9P104 306 aa10.18□□□□□ -0.78
RFTN1-207ENST00000453536 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 PMS2P5A8MQ11 134 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 H3BMM0 161 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 SSSCA1O60232 199 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 CD5P06127 495 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 OR4E1P0C645 316 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 GPX4P36969 197 aaPredicted RBP10.17□□□□□ -0.78
RFTN1-207ENST00000453536 PAX9P55771 341 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 OR4D5Q8NGN0 318 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 LINC00052Q96N35 136 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 SLC25A32Q9H2D1 315 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 TMED3Q9Y3Q3 217 aa10.17□□□□□ -0.78
RFTN1-207ENST00000453536 ZNF701M0R085 212 aaPredicted RBP10.16□□□□□ -0.78
RFTN1-207ENST00000453536 SCGB2A1O75556 95 aa10.16□□□□□ -0.78
RFTN1-207ENST00000453536 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms