RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 A0A1W2PS18 150 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 RPL12P30050 165 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 BAXQ07812 192 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 OR2F1Q13607 317 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 CD300EQ496F6 205 aaPredicted RBP11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 LAMTOR1Q6IAA8 161 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 BTNL8Q6UX41 500 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 RBPMS2Q6ZRY4 209 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 UQCC1Q9NVA1 299 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 MLXQ9UH92 298 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
NCKIPSD-207ENST00000453349 CHEK1O14757 476 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 HNRNPCP07910 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 LYL1P12980 280 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 NUP62P37198 522 aaPredicted RBP11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 DEFA6Q01524 100 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 RAB31Q13636 194 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 CYP2G1PQ6ZSU1 146 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 BPIFCQ8NFQ6 507 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 TMEM231Q9H6L2 316 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
NCKIPSD-207ENST00000453349 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 TRAV25A0A0B4J276 109 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 CD5P06127 495 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 GP9P14770 177 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 CRYBB3P26998 211 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 LYZP61626 148 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 SELENOTP62341 195 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 Q6ZNX1 250 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 GRAMD2BQ96HH9 432 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
NCKIPSD-207ENST00000453349 IGHV3OR16-13A0A075B7E8 117 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 IGHV3-74A0A0B4J1X5 117 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 AGPAT2O15120 278 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 S100A7P31151 101 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 GUCA2BQ16661 112 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 OR2T35Q8NGX2 323 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 CHAC2Q8WUX2 184 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 AURKAIP1Q9NWT8 199 aaPredicted RBP11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 HSPB11Q9Y547 144 aa11.03□□□□□ -0.64
NCKIPSD-207ENST00000453349 VWFP04275 2813 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 UBE2L5PA0A1B0GUS4 154 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 ZNF785A8K8V0 405 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 PRB2P02812 416 aaPredicted RBP11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 ORM2P19652 201 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 EIF2B2P49770 351 aaKnown RBP11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 Q5BKY6 102 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 TMEM182Q6ZP80 229 aaPredicted RBP11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 ZNF546Q86UE3 836 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 ST8SIA2Q92186 375 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 PRR25Q96S07 402 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 RNF2Q99496 336 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 WDR83OSQ9Y284 106 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 WNK1Q9H4A3 2382 aa11.02□□□□□ -0.65
NCKIPSD-207ENST00000453349 MPDU1O75352 247 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 DFFBO76075 338 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 FGF7P21781 194 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 CAMLGP49069 296 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 RPL11P62913 178 aaKnown RBP11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 CLINT1Q14677 625 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 TCF24Q7RTU0 167 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 S100A7AQ86SG5 101 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 GTSCR1Q86UQ5 136 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 TMEM61Q8N0U2 210 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 OR1B1Q8NGR6 318 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 MGST2Q99735 147 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 U3KQE9 123 aa11.01□□□□□ -0.65
NCKIPSD-207ENST00000453349 FXYD6-FXYD2A0A087WZ82 144 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 TSPAN4O14817 238 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 HYPMO75409 117 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 IFNA5P01569 189 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 LINC00869P0C866 280 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 DEFB121Q5J5C9 76 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 PXDC1Q5TGL8 231 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 Q6ZRG5 221 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 ATP5SQ99766 215 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 SLC45A2Q9UMX9 530 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
NCKIPSD-207ENST00000453349 BUB3O43684 328 aa10.99□□□□□ -0.65
NCKIPSD-207ENST00000453349 OR5G3P0C626 314 aa10.99□□□□□ -0.65
NCKIPSD-207ENST00000453349 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
NCKIPSD-207ENST00000453349 PLP1P60201 277 aa10.99□□□□□ -0.65
NCKIPSD-207ENST00000453349 FAM90A2PQ658T7 463 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms