RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CLINT1Q14677 625 aa16.4■□□□□ 0.22
C9orf3-208ENST00000451893 TM2D3Q9BRN9 247 aa16.4■□□□□ 0.22
C9orf3-208ENST00000451893 SLC25A32Q9H2D1 315 aa16.4■□□□□ 0.22
C9orf3-208ENST00000451893 TRBV7-1A0A0A6YYK4 115 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 CRYGCP07315 174 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 FOLR2P14207 255 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 CTRB1P17538 263 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 ARL16Q0P5N6 197 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 CTRB2Q6GPI1 263 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 OR8G2PQ6IF36 304 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 SCGB1C1Q8TD33 95 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 TMEM147Q9BVK8 224 aa16.39■□□□□ 0.21
C9orf3-208ENST00000451893 TECRQ9NZ01 308 aaKnown RBP16.39■□□□□ 0.21
C9orf3-208ENST00000451893 C2orf70A6NJV1 201 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 IFNA4P05014 189 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 DLK1P80370 383 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 VWC2Q2TAL6 325 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 CLLU1Q5K131 121 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 ALKAL2Q6UX46 152 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 CITED4Q96RK1 184 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 UQCC1Q9NVA1 299 aa16.38■□□□□ 0.21
C9orf3-208ENST00000451893 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 SPP1P10451 314 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 HAGHQ16775 308 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 CASC10Q5T4H9 136 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 SLC25A24Q6NUK1 477 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 ZNF114Q8NC26 417 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 OR1L6Q8NGR2 347 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 RNASEH2CQ8TDP1 164 aaKnown RBP16.37■□□□□ 0.21
C9orf3-208ENST00000451893 RNF141Q8WVD5 230 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 FANCD2OSQ96PS1 177 aa16.37■□□□□ 0.21
C9orf3-208ENST00000451893 A0A1B0GW64 132 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 LGALS9O00182 355 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 OR13C7P0DN81 318 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 RNASE2P10153 161 aaKnown RBP16.36■□□□□ 0.21
C9orf3-208ENST00000451893 GPX4P36969 197 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-208ENST00000451893 RAB5CP51148 216 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 SLC16A13Q7RTY0 426 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 GPHB5Q86YW7 130 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 OR10W1Q8NGF6 305 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 CACNG8Q8WXS5 425 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 CCDC140Q96MF4 163 aa16.36■□□□□ 0.21
C9orf3-208ENST00000451893 IGLV11-55A0A075B6I3 123 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 PRSS46E5RG02 174 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 MPDU1O75352 247 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 CLEC3BP05452 202 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 GPR183P32249 361 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 WT1-ASQ06250 92 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 DEFB114Q30KQ6 69 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 PVRIGQ6DKI7 326 aa16.35■□□□□ 0.21
C9orf3-208ENST00000451893 MFSD2BA6NFX1 497 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 UMAD1C9J7I0 102 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 CORTO00230 105 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 CBLN1P23435 193 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 ZFAND6Q6FIF0 208 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 OR1P1Q8NH06 330 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 TMEM170AQ8WVE7 144 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 TMED6Q8WW62 240 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 PSMG3Q9BT73 122 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-208ENST00000451893 WDR61Q9GZS3 305 aaKnown RBP16.34■□□□□ 0.21
C9orf3-208ENST00000451893 SRD5A3Q9H8P0 318 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 NPVFQ9HCQ7 196 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 TIMM9Q9Y5J7 89 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 SELENOKQ9Y6D0 94 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 NBEAL2Q6ZNJ1 2754 aa16.34■□□□□ 0.21
C9orf3-208ENST00000451893 OR11H12B2RN74 326 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 SULT1A2P50226 295 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 SERF2P84101 59 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 ETFRF1Q6IPR1 90 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 HSD17B11Q8NBQ5 300 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 SAT2Q96F10 170 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-208ENST00000451893 STAB2Q8WWQ8 2551 aa16.33■□□□□ 0.2
C9orf3-208ENST00000451893 KMT2CQ8NEZ4 4911 aaKnown RBP16.33■□□□□ 0.2
C9orf3-208ENST00000451893 CD7P09564 240 aa16.32■□□□□ 0.2
C9orf3-208ENST00000451893 EDN2P20800 178 aa16.32■□□□□ 0.2
C9orf3-208ENST00000451893 ATP6V0CP27449 155 aa16.32■□□□□ 0.2
C9orf3-208ENST00000451893 RBPMS2Q6ZRY4 209 aaKnown RBP16.32■□□□□ 0.2
C9orf3-208ENST00000451893 DEFB125Q8N687 156 aa16.32■□□□□ 0.2
C9orf3-208ENST00000451893 UFC1Q9Y3C8 167 aa16.32■□□□□ 0.2
C9orf3-208ENST00000451893 IGHV3-35A0A0C4DH35 117 aa16.31■□□□□ 0.2
C9orf3-208ENST00000451893 ADAMTSL5Q6ZMM2 481 aa16.31■□□□□ 0.2
C9orf3-208ENST00000451893 WDR83OSQ9Y284 106 aa16.31■□□□□ 0.2
C9orf3-208ENST00000451893 DMRT1Q9Y5R6 373 aa16.31■□□□□ 0.2
C9orf3-208ENST00000451893 F11RQ9Y624 299 aaKnown RBP16.31■□□□□ 0.2
C9orf3-208ENST00000451893 RPS10-NUDT3A0A1W2PQS6 291 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 ZNF785A8K8V0 405 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 A8MWP6 167 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 C17orf112F2Z3M2 114 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 BLOC1S1P78537 153 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 RAB31Q13636 194 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 BTNL8Q6UX41 500 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 DPPA3Q6W0C5 159 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 ZNF709Q8N972 641 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 OR2G3Q8NGZ4 309 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 ZNF502Q8TBZ5 544 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 MARC2Q969Z3 335 aa16.3■□□□□ 0.2
C9orf3-208ENST00000451893 UBE2L5PA0A1B0GUS4 154 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 TMEM213A2RRL7 107 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 NMBP08949 121 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms