RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
USP54-207ENST00000451492 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
USP54-207ENST00000451492 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 NAP1L6A6NFF2 107 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 CENPXA8MT69 81 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 DEFB4AO15263 64 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 SYNGR2O43760 224 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 PITX3O75364 302 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 MED6O75586 246 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 JTBO76095 146 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 NDUFB6O95139 128 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 IL7P13232 177 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 ANXA7P20073 488 aaKnown RBP7.11□□□□□ -1.27
USP54-207ENST00000451492 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
USP54-207ENST00000451492 GAMTQ14353 236 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 C4orf46Q504U0 113 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 SPANXN5Q5MJ07 72 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 C16orf54Q6UWD8 224 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 SIGLEC15Q6ZMC9 328 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 LRTM2Q8N967 370 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 GLMPQ8WWB7 406 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 DEDD2Q8WXF8 326 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 PPP1R14BQ96C90 147 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 RARRES2Q99969 163 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 TMED3Q9Y3Q3 217 aa7.11□□□□□ -1.27
USP54-207ENST00000451492 IGKV1D-37A0A075B6S9 117 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 PIGBOS1A0A0B4J2F0 54 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 SMCO3A2RU48 225 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 HELTA6NFD8 242 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 SSSCA1O60232 199 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 OR4E1P0C645 316 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 BTCP35070 178 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 AKR1C1Q04828 323 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 ACTL10Q5JWF8 245 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 OR11H2Q8NH07 326 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 COQ8AQ8NI60 647 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
USP54-207ENST00000451492 DNAH1Q9P2D7 4330 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 FAM90A26D6RGX4 464 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 SLC25A6P12236 298 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 C4BPBP20851 252 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.27
USP54-207ENST00000451492 POLR2GP62487 172 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP54-207ENST00000451492 RPP30P78346 268 aaKnown RBP7.09□□□□□ -1.27
USP54-207ENST00000451492 OR8G2PQ6IF36 304 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 CIB3Q96Q77 187 aaPredicted RBP7.09□□□□□ -1.27
USP54-207ENST00000451492 C20orf85Q9H1P6 137 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 FBXL17Q9UF56 701 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 U3KQE9 123 aa7.09□□□□□ -1.27
USP54-207ENST00000451492 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 IGKV1OR2-108A0A075B7D4 117 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 CCSO14618 274 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 BUB3O43684 328 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 IFNA21P01568 189 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 FABP1P07148 127 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 GATA2P23769 480 aaPredicted RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 NKX2-1P43699 371 aaPredicted RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 AP2S1P53680 142 aaPredicted RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 DEFB1P60022 68 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 NANOS2P60321 138 aaKnown RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 RRAS2P62070 204 aaPredicted RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 ACOT7LQ6ZUV0 252 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 TRPT1Q86TN4 253 aaKnown RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 GATAD1Q8WUU5 269 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 SLC25A22Q9H936 323 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 NRN1Q9NPD7 142 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 PSENENQ9NZ42 101 aa7.08□□□□□ -1.28
USP54-207ENST00000451492 STRAPQ9Y3F4 350 aaKnown RBP7.08□□□□□ -1.28
USP54-207ENST00000451492 NUPR2A6NF83 97 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 LYRM1O43325 122 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 CCNKO75909 580 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 NUP62P37198 522 aaPredicted RBP7.07□□□□□ -1.28
USP54-207ENST00000451492 FXYD7P58549 80 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
USP54-207ENST00000451492 IAH1Q2TAA2 248 aaPredicted RBP7.07□□□□□ -1.28
USP54-207ENST00000451492 TMEM217Q8N7C4 229 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 OR4D5Q8NGN0 318 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 LINC00052Q96N35 136 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 RAB40CQ96S21 281 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 C7orf50Q9BRJ6 194 aaKnown RBP7.07□□□□□ -1.28
USP54-207ENST00000451492 GSKIPQ9P0R6 139 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 DOK5Q9P104 306 aa7.07□□□□□ -1.28
USP54-207ENST00000451492 SNRPGP15A8MWD9 76 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 PLA2G10O15496 165 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 LY6G6CO95867 125 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 METTL15P1P0C7V9 234 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 SPP1P10451 314 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 ORM2P19652 201 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 ATP5IP56385 69 aaPredicted RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 TMEM182Q6ZP80 229 aaPredicted RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 THAP8Q8NA92 274 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 ZBTB8BQ8NAP8 495 aaPredicted RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms