RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RBKSQ9H477 322 aa19.61■□□□□ 0.73
USP42-204ENST00000451154 MCUBQ9NWR8 336 aa19.61■□□□□ 0.73
USP42-204ENST00000451154 CCDC59Q9P031 241 aaKnown RBP19.61■□□□□ 0.73
USP42-204ENST00000451154 CCR6P51684 374 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 SNRPD3P62318 126 aaKnown RBP19.6■□□□□ 0.73
USP42-204ENST00000451154 SMCO1Q147U7 214 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 SIGLEC15Q6ZMC9 328 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 LGI3Q8N145 548 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 DTD1Q8TEA8 209 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 SCGB3A2Q96PL1 93 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 NRN1Q9NPD7 142 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 HSPB7Q9UBY9 170 aa19.6■□□□□ 0.73
USP42-204ENST00000451154 A0A0B4J2A0 478 aa19.59■□□□□ 0.73
USP42-204ENST00000451154 SUPT4H1P63272 117 aaKnown RBP19.59■□□□□ 0.73
USP42-204ENST00000451154 KLF9Q13886 244 aaPredicted RBP19.59■□□□□ 0.73
USP42-204ENST00000451154 RAB2BQ8WUD1 216 aa19.59■□□□□ 0.73
USP42-204ENST00000451154 XCL2Q9UBD3 114 aa19.59■□□□□ 0.73
USP42-204ENST00000451154 RSL24D1Q9UHA3 163 aaKnown RBP19.59■□□□□ 0.73
USP42-204ENST00000451154 SHPKQ9UHJ6 478 aa19.59■□□□□ 0.73
USP42-204ENST00000451154 H3BMM0 161 aa19.57■□□□□ 0.72
USP42-204ENST00000451154 CENPSQ8N2Z9 138 aa19.57■□□□□ 0.72
USP42-204ENST00000451154 SOSTQ9BQB4 213 aa19.57■□□□□ 0.72
USP42-204ENST00000451154 PBDC1Q9BVG4 233 aa19.57■□□□□ 0.72
USP42-204ENST00000451154 SEPSECSQ9HD40 501 aaKnown RBP19.57■□□□□ 0.72
USP42-204ENST00000451154 CELA1Q9UNI1 258 aa19.57■□□□□ 0.72
USP42-204ENST00000451154 TRAV10A0A0B4J240 114 aa19.56■□□□□ 0.72
USP42-204ENST00000451154 TNFSF8P32971 234 aa19.56■□□□□ 0.72
USP42-204ENST00000451154 TMBIM6P55061 237 aa19.56■□□□□ 0.72
USP42-204ENST00000451154 ZNF767PQ75MW2 155 aa19.56■□□□□ 0.72
USP42-204ENST00000451154 RNF125Q96EQ8 232 aa19.56■□□□□ 0.72
USP42-204ENST00000451154 FABP12A6NFH5 140 aa19.55■□□□□ 0.72
USP42-204ENST00000451154 NUTF2P61970 127 aaKnown RBP19.55■□□□□ 0.72
USP42-204ENST00000451154 ZNF90Q03938 601 aa19.55■□□□□ 0.72
USP42-204ENST00000451154 GAMTQ14353 236 aa19.55■□□□□ 0.72
USP42-204ENST00000451154 OR1S1Q8NH92 325 aa19.55■□□□□ 0.72
USP42-204ENST00000451154 IGHV4-4A0A075B6R2 117 aa19.54■□□□□ 0.72
USP42-204ENST00000451154 ZFP92A6NM28 416 aa19.54■□□□□ 0.72
USP42-204ENST00000451154 GPX4P36969 197 aaPredicted RBP19.54■□□□□ 0.72
USP42-204ENST00000451154 DEFB1P60022 68 aa19.54■□□□□ 0.72
USP42-204ENST00000451154 C12orf74Q32Q52 190 aa19.54■□□□□ 0.72
USP42-204ENST00000451154 C1QTNF4Q9BXJ3 329 aa19.54■□□□□ 0.72
USP42-204ENST00000451154 SLIRPQ9GZT3 109 aaKnown RBP19.54■□□□□ 0.72
USP42-204ENST00000451154 HECTD4Q9Y4D8 3996 aa19.53■□□□□ 0.72
USP42-204ENST00000451154 IGKV1D-37A0A075B6S9 117 aa19.53■□□□□ 0.72
USP42-204ENST00000451154 ANXA3P12429 323 aa19.53■□□□□ 0.72
USP42-204ENST00000451154 BCL7BQ9BQE9 202 aa19.53■□□□□ 0.72
USP42-204ENST00000451154 NKX2-1P43699 371 aaPredicted RBP19.52■□□□□ 0.72
USP42-204ENST00000451154 GDF5OSQ5U4N7 250 aa19.52■□□□□ 0.72
USP42-204ENST00000451154 GSG1LQ6UXU4 331 aa19.52■□□□□ 0.72
USP42-204ENST00000451154 LINC00052Q96N35 136 aa19.52■□□□□ 0.72
USP42-204ENST00000451154 WDR12Q9GZL7 423 aaKnown RBP19.52■□□□□ 0.72
USP42-204ENST00000451154 IGKV3-20P01619 116 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 HLA-DRB4P13762 266 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 ATP5IP56385 69 aaPredicted RBP19.51■□□□□ 0.71
USP42-204ENST00000451154 SRPXP78539 464 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 SLC35E1Q96K37 410 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 HLA-DRB4X5D2U9 266 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 HERC2O95714 4834 aa19.51■□□□□ 0.71
USP42-204ENST00000451154 FXYD7P58549 80 aa19.5■□□□□ 0.71
USP42-204ENST00000451154 OR2F1Q13607 317 aa19.5■□□□□ 0.71
USP42-204ENST00000451154 OR8G2PQ6IF36 304 aa19.5■□□□□ 0.71
USP42-204ENST00000451154 TMED4Q7Z7H5 227 aa19.5■□□□□ 0.71
USP42-204ENST00000451154 PFDN2Q9UHV9 154 aa19.5■□□□□ 0.71
USP42-204ENST00000451154 DEFB131BA0A096LNP1 70 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 H3BMQ9 156 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 PITX3O75364 302 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 IAPPP10997 89 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 NUP62P37198 522 aaPredicted RBP19.49■□□□□ 0.71
USP42-204ENST00000451154 LYZP61626 148 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 MCFD2Q8NI22 146 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 RNF126Q9BV68 326 aa19.49■□□□□ 0.71
USP42-204ENST00000451154 SNRPGP15A8MWD9 76 aa19.48■□□□□ 0.71
USP42-204ENST00000451154 SCRT1Q9BWW7 348 aa19.48■□□□□ 0.71
USP42-204ENST00000451154 PAIP2BQ9ULR5 123 aaKnown RBP19.48■□□□□ 0.71
USP42-204ENST00000451154 NOL3O60936 208 aaKnown RBP19.46■□□□□ 0.71
USP42-204ENST00000451154 FABP1P07148 127 aa19.46■□□□□ 0.71
USP42-204ENST00000451154 ID1P41134 155 aa19.46■□□□□ 0.71
USP42-204ENST00000451154 PYDC2Q56P42 97 aa19.46■□□□□ 0.71
USP42-204ENST00000451154 C1orf194Q5T5A4 169 aa19.46■□□□□ 0.71
USP42-204ENST00000451154 ZNF705AQ6ZN79 300 aaPredicted RBP19.46■□□□□ 0.71
USP42-204ENST00000451154 PPP1R14BQ96C90 147 aa19.46■□□□□ 0.71
USP42-204ENST00000451154 SAV1Q9H4B6 383 aaPredicted RBP19.46■□□□□ 0.71
USP42-204ENST00000451154 IGHV3OR16-12A0A075B7B8 117 aa19.45■□□□□ 0.7
USP42-204ENST00000451154 FAUP35544 74 aaKnown RBP19.45■□□□□ 0.7
USP42-204ENST00000451154 EMP1P54849 157 aa19.45■□□□□ 0.7
USP42-204ENST00000451154 RAB11AP62491 216 aa19.45■□□□□ 0.7
USP42-204ENST00000451154 TMEM128Q5BJH2 165 aa19.45■□□□□ 0.7
USP42-204ENST00000451154 TRGV9Q99603 122 aa19.45■□□□□ 0.7
USP42-204ENST00000451154 IGKV1OR2-108A0A075B7D4 117 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 DUXBA0A1W2PPF3 345 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 SOCS3O14543 225 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 VAMP1P23763 118 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 FOXI2Q6ZQN5 318 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 OR8I2Q8N0Y5 310 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 TOMM5Q8N4H5 51 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 OR4B1Q8NGF8 309 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 TRIM63Q969Q1 353 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 NEU1Q99519 415 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 KRTAP17-1Q9BYP8 105 aa19.44■□□□□ 0.7
USP42-204ENST00000451154 PIGBOS1A0A0B4J2F0 54 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms