RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	C1orf194	Q5T5A4	169 aa		11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	STXBP6	Q8NFX7	210 aa		11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	ACY3	Q96HD9	319 aa		11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	SLC35E1	Q96K37	410 aa		11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	C7orf50	Q9BRJ6	194 aa	Known RBP	11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	MFF	Q9GZY8	342 aa		11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	C11orf68	Q9H3H3	251 aa	Known RBP	11.77	□□□□□ -0.53
SGCE-208	ENST00000450385	IGHV3-66	A0A0C4DH42	116 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	SNRPGP15	A8MWD9	76 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	PSG1	P11464	419 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	GAMT	Q14353	236 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	SAMD13	Q5VXD3	122 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	SRR	Q9GZT4	340 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	PRR13	Q9NZ81	148 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	FBXL17	Q9UF56	701 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	RYR2	Q92736	4967 aa		11.76	□□□□□ -0.53
SGCE-208	ENST00000450385	AGRN	O00468	2067 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	CXorf65	A6NEN9	183 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	ZFP92	A6NM28	416 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	SYNGR2	O43760	224 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	NXPH3	O95157	252 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	CA1	P00915	261 aa	Predicted RBP	11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	NUTF2	P61970	127 aa	Known RBP	11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	DHRS2	Q13268	280 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	GGNBP1	Q5YKI7	109 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	TRIQK	Q629K1	86 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	OR11H2	Q8NH07	326 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	RNF125	Q96EQ8	232 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	TRGV9	Q99603	122 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	NRN1	Q9NPD7	142 aa		11.75	□□□□□ -0.53
SGCE-208	ENST00000450385	NDUFB6	O95139	128 aa		11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	PPP1R1A	Q13522	171 aa		11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	USF2	Q15853	346 aa	Predicted RBP	11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	ZNF124	Q15973	351 aa		11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	SIGLEC15	Q6ZMC9	328 aa		11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	TRPT1	Q86TN4	253 aa	Known RBP	11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	SLC45A2	Q9UMX9	530 aa		11.74	□□□□□ -0.53
SGCE-208	ENST00000450385	IFNA21	P01568	189 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	LEMD1	Q68G75	181 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	FAM24B	Q8N5W8	94 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	THAP8	Q8NA92	274 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	COQ8A	Q8NI60	647 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	C1QTNF4	Q9BXJ3	329 aa		11.73	□□□□□ -0.53
SGCE-208	ENST00000450385	C9orf170	A2RU37	121 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	ZNF688	P0C7X2	276 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	TCTA	P57738	103 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	ID3	Q02535	119 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	SPATA31B1P	Q5VZV4	182 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	RAB40C	Q96S21	281 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	HRH4	Q9H3N8	390 aa		11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	PLEC	Q15149	4684 aa	Known RBP	11.72	□□□□□ -0.53
SGCE-208	ENST00000450385	IGKV1D-37	A0A075B6S9	117 aa		11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	MIF	P14174	115 aa		11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	ID1	P41134	155 aa		11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	NKX2-1	P43699	371 aa	Predicted RBP	11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	BAK1	Q16611	211 aa		11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	CLUHP3	Q96NS8	147 aa		11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	STRAP	Q9Y3F4	350 aa	Known RBP	11.71	□□□□□ -0.53
SGCE-208	ENST00000450385	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	HOXB5	P09067	269 aa		11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	MEOX2	P50222	304 aa		11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	LINC00299	Q6ZSB3	139 aa		11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	S100A7A	Q86SG5	101 aa		11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	C11orf45	Q8TAV5	145 aa		11.7	□□□□□ -0.54
SGCE-208	ENST00000450385	GIG44	P09565	113 aa	Predicted RBP	11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	OR4E1	P0C645	316 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	IAPP	P10997	89 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	ZNF90	Q03938	601 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	PSMG4	Q5JS54	123 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	ACTL10	Q5JWF8	245 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	OR4D5	Q8NGN0	318 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	GPR82	Q96P67	336 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	RNF24	Q9Y225	148 aa		11.69	□□□□□ -0.54
SGCE-208	ENST00000450385	C11orf94	C9JXX5	98 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	PRSS46	E5RG02	174 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	FNDC10	F2Z333	226 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	WRB	O00258	174 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	PSMB3	P49720	205 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	TAS2R30	P59541	319 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	PMS2P11	Q13670	270 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	SPANXN5	Q5MJ07	72 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	TMEM144	Q7Z5S9	345 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	BPIFC	Q8NFQ6	507 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	LINC00476	Q8WZB0	136 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	SMIM8	Q96KF7	97 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385	PBDC1	Q9BVG4	233 aa		11.68	□□□□□ -0.54
SGCE-208	ENST00000450385		H3BMM0	161 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	ISLR	O14498	428 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	HLA-DRB4	P13762	266 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	SELENOT	P62341	195 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	OR8I2	Q8N0Y5	310 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385		Q8NAQ8	132 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	CSNK1G2-AS1	Q8NCQ2	148 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	SDHC	Q99643	169 aa	Predicted RBP	11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	PAIP2B	Q9ULR5	123 aa	Known RBP	11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	HLA-DRB4	X5D2U9	266 aa		11.67	□□□□□ -0.54
SGCE-208	ENST00000450385	ALMS1	Q8TCU4	4167 aa		11.66	□□□□□ -0.54

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