RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
CHD3-205ENST00000449744 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
CHD3-205ENST00000449744 PBDC1Q9BVG4 233 aa11.2□□□□□ -0.62
CHD3-205ENST00000449744 SRRQ9GZT4 340 aa11.2□□□□□ -0.62
CHD3-205ENST00000449744 NAP1L6A6NFF2 107 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 HOXB5P09067 269 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 NUP62P37198 522 aaPredicted RBP11.19□□□□□ -0.62
CHD3-205ENST00000449744 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
CHD3-205ENST00000449744 GAMTQ14353 236 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 TMEM41BQ5BJD5 291 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 CEMP1Q6PRD7 247 aaPredicted RBP11.19□□□□□ -0.62
CHD3-205ENST00000449744 RNF125Q96EQ8 232 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
CHD3-205ENST00000449744 KLK5Q9Y337 293 aaPredicted RBP11.19□□□□□ -0.62
CHD3-205ENST00000449744 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
CHD3-205ENST00000449744 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 BUB3O43684 328 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 SPP1P10451 314 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 UBE2MP61081 183 aaKnown RBP11.18□□□□□ -0.62
CHD3-205ENST00000449744 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
CHD3-205ENST00000449744 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
CHD3-205ENST00000449744 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
CHD3-205ENST00000449744 NRN1Q9NPD7 142 aa11.18□□□□□ -0.62
CHD3-205ENST00000449744 WRBO00258 174 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 SYNGR2O43760 224 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 ZNF90Q03938 601 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 GGNBP1Q5YKI7 109 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 OR8G2PQ6IF36 304 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 MAGT1Q9H0U3 335 aa11.17□□□□□ -0.62
CHD3-205ENST00000449744 BIRC6Q9NR09 4857 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 CENPXA8MT69 81 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 SNRPGP15A8MWD9 76 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 LYZP61626 148 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 BAK1Q16611 211 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
CHD3-205ENST00000449744 PPP1R14BQ96C90 147 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 MFFQ9GZY8 342 aa11.16□□□□□ -0.62
CHD3-205ENST00000449744 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
CHD3-205ENST00000449744 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
CHD3-205ENST00000449744 IGKV1D-37A0A075B6S9 117 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 NDUFB6O95139 128 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 LY6G6CO95867 125 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 OR2F1Q13607 317 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 SPANXN5Q5MJ07 72 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 LINC00476Q8WZB0 136 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 TRGV9Q99603 122 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
CHD3-205ENST00000449744 DEFB4AO15263 64 aa11.14□□□□□ -0.63
CHD3-205ENST00000449744 ADAP1O75689 374 aa11.14□□□□□ -0.63
CHD3-205ENST00000449744 IFNA21P01568 189 aa11.14□□□□□ -0.63
CHD3-205ENST00000449744 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
CHD3-205ENST00000449744 FLVCR2Q9UPI3 526 aa11.14□□□□□ -0.63
CHD3-205ENST00000449744 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 DNAH1Q9P2D7 4330 aa11.13□□□□□ -0.63
CHD3-205ENST00000449744 CFDP00746 253 aaPredicted RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 C4BPBP20851 252 aa11.13□□□□□ -0.63
CHD3-205ENST00000449744 NANOS2P60321 138 aaKnown RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 C4orf46Q504U0 113 aa11.13□□□□□ -0.63
CHD3-205ENST00000449744 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
CHD3-205ENST00000449744 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
CHD3-205ENST00000449744 AGRNO00468 2067 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 H3BP45 60 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
CHD3-205ENST00000449744 OR4E1P0C645 316 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 MIFP14174 115 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 ID1P41134 155 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 AKR1C1Q04828 323 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 C1orf194Q5T5A4 169 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 OR8I2Q8N0Y5 310 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 CLEC5AQ9NY25 188 aa11.12□□□□□ -0.63
CHD3-205ENST00000449744 IL7P13232 177 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 NKX2-1P43699 371 aaPredicted RBP11.11□□□□□ -0.63
CHD3-205ENST00000449744 POLR2GP62487 172 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHD3-205ENST00000449744 ID3Q02535 119 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 CNPY1Q3B7I2 92 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 BPIFCQ8NFQ6 507 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 LINC00052Q96N35 136 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 SDHCQ99643 169 aaPredicted RBP11.11□□□□□ -0.63
CHD3-205ENST00000449744 PSENENQ9NZ42 101 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 NDUFA13Q9P0J0 144 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
CHD3-205ENST00000449744 IGKV1OR2-108A0A075B7D4 117 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 H3BMM0 161 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
CHD3-205ENST00000449744 S100A7P31151 101 aa11.1□□□□□ -0.63
CHD3-205ENST00000449744 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms