RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MFSD2BA6NFX1 497 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 CXCL3P19876 107 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 XGP55808 180 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 MORN3Q6PF18 240 aaPredicted RBP8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 H2BFWTQ7Z2G1 175 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 HSD17B13Q7Z5P4 300 aaPredicted RBP8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 SLC35G3Q8N808 338 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 GPHA2Q96T91 129 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 SRSF8Q9BRL6 282 aaKnown RBP8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 C20orf24Q9BUV8 137 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM140Q9NV12 185 aa8.97□□□□□ -0.97
AC004540.1-204ENST00000449537 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 A0A1B0GW64 132 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 DBX1A6NMT0 343 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 TEX22C9J3V5 150 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 K7EMT4 169 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 CRYGCP07315 174 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 P0C879 139 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 DEFA4P12838 97 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 HLA-GP17693 338 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 RPL8P62917 257 aaKnown RBP8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 CD300CQ08708 224 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 SMCO1Q147U7 214 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 KLK9Q2XQG4 91 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 SP6Q3SY56 376 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 AARDQ4LEZ3 155 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 NMSQ5H8A3 153 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 STHQ8IWL8 128 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 SELENOHQ8IZQ5 122 aaKnown RBP8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 NMES1Q9C002 83 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 KLK9Q9UKQ9 250 aa8.96□□□□□ -0.98
AC004540.1-204ENST00000449537 A0A1B0GU03 582 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 FAM90A26D6RGX4 464 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 KRASP01116 189 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 IGKV1-39P01597 117 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 IGKV1D-39P04432 117 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 IL6RP08887 468 aaPredicted RBP8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 G6PCP35575 357 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 LHFPL5Q8TAF8 219 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 ZNF502Q8TBZ5 544 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 RNF2Q99496 336 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 SMPXQ9UHP9 88 aa8.95□□□□□ -0.98
AC004540.1-204ENST00000449537 UPK2O00526 184 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 TGOLN2O43493 480 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 ZNF207O43670 478 aaKnown RBP8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 IGKV1-5P01602 117 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 DEFB131AP59861 70 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 LEMD1Q68G75 181 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 OR52E5Q8NH55 327 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 THAP6Q8TBB0 222 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 ATG101Q9BSB4 218 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 COMMD5Q9GZQ3 224 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 TMEM14BQ9NUH8 114 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 FAT1Q14517 4588 aa8.94□□□□□ -0.98
AC004540.1-204ENST00000449537 IGLV11-55A0A075B6I3 123 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 IGHV3OR16-8A0A075B7F1 116 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 E7EUB6 86 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 NDUFA4O00483 81 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 DFFBO76075 338 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 HOXB5P09067 269 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 SPP1P10451 314 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 AREGP15514 252 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 RPL27AP46776 148 aaKnown RBP8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 H2BFSP57053 126 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 C2orf50Q96LR7 162 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 RHPN1-AS1Q9BWJ2 59 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 CLEC5AQ9NY25 188 aa8.93□□□□□ -0.98
AC004540.1-204ENST00000449537 FXYD6-FXYD2A0A087WZ82 144 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 INS-IGF2F8WCM5 200 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 CCSO14618 274 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 CHEK1O14757 476 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 MED6O75586 246 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 SIX6O95475 246 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 RLN2P04090 185 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 IAH1Q2TAA2 248 aaPredicted RBP8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 GGNBP1Q5YKI7 109 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 LYZL2Q7Z4W2 148 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 TMEM116Q8NCL8 245 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 OR1L8Q8NGR8 309 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 QTRT1Q9BXR0 403 aaKnown RBP8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 CACNG5Q9UF02 275 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
AC004540.1-204ENST00000449537 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 HMSDA8MTL9 139 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 SMLR1H3BR10 107 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 L7N2F9 121 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 CYB5BO43169 146 aa8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 NKX2-5P52952 324 aaPredicted RBP8.91□□□□□ -0.98
AC004540.1-204ENST00000449537 SPCS3P61009 180 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms