RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 APOC4P55056 127 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 PAX9P55771 341 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 THAP8Q8NA92 274 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 COQ8AQ8NI60 647 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 RNF183Q96D59 192 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 CCDC32Q9BV29 185 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
RTFDC1-204ENST00000449062 AGRNO00468 2067 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 PMS2P5A8MQ11 134 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 SPRY2O43597 315 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 DEFB131AP59861 70 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 RAB11AP62491 216 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 C4orf46Q504U0 113 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 TRGV9Q99603 122 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 CSTL1Q9H114 145 aa10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 PLECQ15149 4684 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-204ENST00000449062 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 SLC35E1Q96K37 410 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 SMIM8Q96KF7 97 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 C20orf85Q9H1P6 137 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
RTFDC1-204ENST00000449062 HELTA6NFD8 242 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 IFNA21P01568 189 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 AP2S1P53680 142 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 RPP30P78346 268 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 SPANXN5Q5MJ07 72 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 TMEM182Q6ZP80 229 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 ZBTB8BQ8NAP8 495 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-204ENST00000449062 SNRPGP15A8MWD9 76 aa10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 EIF2B2P49770 351 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 IAH1Q2TAA2 248 aaPredicted RBP10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 LYSTQ99698 3801 aa10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 SEPSECSQ9HD40 501 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 STRAPQ9Y3F4 350 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-204ENST00000449062 H3BP45 60 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 MBPP02686 304 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 TAS2R30P59541 319 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 IFITM3Q01628 133 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 IL15RAQ13261 267 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 ASAH1Q13510 395 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 OR2F1Q13607 317 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 ZNF431Q8TF32 576 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 S100ZQ8WXG8 99 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 C17orf77Q96MU5 243 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 NUDT15Q9NV35 164 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 PSENENQ9NZ42 101 aa10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 RCL1Q9Y2P8 373 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-204ENST00000449062 TRAV6A0A075B6T7 132 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 CCNKO75909 580 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 C1orf194Q5T5A4 169 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 SIGLEC15Q6ZMC9 328 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 TMEM144Q7Z5S9 345 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 TRPT1Q86TN4 253 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 RAB40CQ96S21 281 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 PBDC1Q9BVG4 233 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 C11orf1Q9H5F2 150 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
RTFDC1-204ENST00000449062 A0A0J9YWU9 116 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 C7orf66A4D0T2 115 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 SSSCA1O60232 199 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 CFDP00746 253 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 FABP1P07148 127 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 ATF4P18848 351 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 GATA2P23769 480 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 ARL16Q0P5N6 197 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 ACOT7LQ6ZUV0 252 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 PTTG2Q9NZH5 202 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 GSKIPQ9P0R6 139 aa10.28□□□□□ -0.76
RTFDC1-204ENST00000449062 FAM240BA0A1B0GVZ2 78 aa10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 SOCS3O14543 225 aa10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 CCSO14618 274 aa10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 TSC22D2O75157 780 aa10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 LYZP61626 148 aa10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 C12orf45Q8N5I9 185 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-204ENST00000449062 WDR12Q9GZL7 423 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms