RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 SELENOHQ8IZQ5 122 aaKnown RBP9.55□□□□□ -0.88
HMGB3-204ENST00000448905 OR4D10Q8NGI6 311 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 OR51G1Q8NGK1 321 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 GPR146Q96CH1 333 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 LINC00052Q96N35 136 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 SCGB3A2Q96PL1 93 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 RTBDNQ9BSG5 229 aaPredicted RBP9.55□□□□□ -0.88
HMGB3-204ENST00000448905 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
HMGB3-204ENST00000448905 IGHV3OR16-12A0A075B7B8 117 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 PIGBOS1A0A0B4J2F0 54 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 SULT1A3P0DMM9 295 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 SULT1A4P0DMN0 295 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 PSG1P11464 419 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 C1orf194Q5T5A4 169 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 GPR107Q5VW38 600 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 EBLN2Q6P2I7 272 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 ZNF705AQ6ZN79 300 aaPredicted RBP9.54□□□□□ -0.88
HMGB3-204ENST00000448905 PBDC1Q9BVG4 233 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
HMGB3-204ENST00000448905 ZFP92A6NM28 416 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 RGS5O15539 181 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 IGKV3-20P01619 116 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 GPX4P36969 197 aaPredicted RBP9.53□□□□□ -0.88
HMGB3-204ENST00000448905 NMSQ5H8A3 153 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 OR8G2PQ6IF36 304 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 COQ8AQ8NI60 647 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 IL22RA2Q969J5 263 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 CLUHP3Q96NS8 147 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 PRRT1Q99946 306 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 NIPSNAP3BQ9BS92 247 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 TMEM56-RWDD3S4R434 201 aa9.53□□□□□ -0.88
HMGB3-204ENST00000448905 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 ZNF705DP0CH99 300 aaPredicted RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 ZNF705BP0CI00 300 aaPredicted RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 CCR6P51684 374 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 RNF212Q495C1 297 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 FOXI2Q6ZQN5 318 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 LGI3Q8N145 548 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 OR4B1Q8NGF8 309 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 PPP1R14BQ96C90 147 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 RNF125Q96EQ8 232 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 C7orf50Q9BRJ6 194 aaKnown RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 RABL2AQ9UBK7 228 aaPredicted RBP9.52□□□□□ -0.89
HMGB3-204ENST00000448905 RABL2BQ9UNT1 228 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 GPR132Q9UNW8 380 aa9.52□□□□□ -0.89
HMGB3-204ENST00000448905 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 HBE1P02100 147 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 AKAIN1P0CW23 69 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 PSMB3P49720 205 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 PSG9Q00887 426 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 LHFPL5Q8TAF8 219 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 DTD1Q8TEA8 209 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 SLC35E1Q96K37 410 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 SCP2D1Q9UJQ7 156 aa9.51□□□□□ -0.89
HMGB3-204ENST00000448905 ISLRO14498 428 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 RTL8CO15255 209 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 NXPH3O95157 252 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 CFDP00746 253 aaPredicted RBP9.5□□□□□ -0.89
HMGB3-204ENST00000448905 ANXA3P12429 323 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 S100A7P31151 101 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 FXYD7P58549 80 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 RAB11AP62491 216 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 SMCO1Q147U7 214 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 OXA1LQ15070 435 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 RPRMQ9NS64 109 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 DKK2Q9UBU2 259 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 HSPB7Q9UBY9 170 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 RYR1P21817 5038 aa9.5□□□□□ -0.89
HMGB3-204ENST00000448905 A0A0B4J2A0 478 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 HTN3P15516 51 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 AKR1C4P17516 323 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 MEOX2P50222 304 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
HMGB3-204ENST00000448905 SRPXP78539 464 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 GAMTQ14353 236 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 CTF1Q16619 201 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 RRN3P1Q2M238 152 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 FAAP20Q6NZ36 180 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 CLVS1Q8IUQ0 354 aaPredicted RBP9.49□□□□□ -0.89
HMGB3-204ENST00000448905 TMEM170AQ8WVE7 144 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 TMEM208Q9BTX3 173 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 MAGT1Q9H0U3 335 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 SHPKQ9UHJ6 478 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
HMGB3-204ENST00000448905 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
HMGB3-204ENST00000448905 LYZP61626 148 aa9.48□□□□□ -0.89
HMGB3-204ENST00000448905 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
HMGB3-204ENST00000448905 ZNF90Q03938 601 aa9.48□□□□□ -0.89
HMGB3-204ENST00000448905 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
HMGB3-204ENST00000448905 FAM78BQ5VT40 261 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms