RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PRKNO60260 465 aaPredicted RBP8.7□□□□□ -1.02
LINC00342-202ENST00000448494 CD24P25063 80 aa8.7□□□□□ -1.02
LINC00342-202ENST00000448494 RSPO1Q2MKA7 263 aaPredicted RBP8.7□□□□□ -1.02
LINC00342-202ENST00000448494 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
LINC00342-202ENST00000448494 CDX2Q99626 313 aaPredicted RBP8.7□□□□□ -1.02
LINC00342-202ENST00000448494 IFI27L2Q9H2X8 130 aa8.7□□□□□ -1.02
LINC00342-202ENST00000448494 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
LINC00342-202ENST00000448494 A8MWV9 139 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 C1orf61Q13536 156 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
LINC00342-202ENST00000448494 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 TMEM101Q96IK0 257 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
LINC00342-202ENST00000448494 SCN10AQ9Y5Y9 1956 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 LAMA3Q16787 3333 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 A0A096LNJ9 63 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 PRSS46E5RG02 174 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 LINC01619G3V211 115 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 NPFFO15130 113 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 SP1P08047 785 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 TMEM240Q5SV17 173 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 MIR17HGQ75NE6 70 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 CIARTQ8N365 385 aaPredicted RBP8.69□□□□□ -1.02
LINC00342-202ENST00000448494 SSMEM1Q8WWF3 244 aa8.69□□□□□ -1.02
LINC00342-202ENST00000448494 HAX1O00165 279 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 IL4P05112 153 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 FGF12P61328 243 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
LINC00342-202ENST00000448494 DRAM1Q8N682 238 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 WDR31Q8NA23 367 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 OR1L4Q8NGR5 311 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PIMREGQ9BSJ6 248 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 OBP2BQ9NPH6 170 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 CRLF1O75462 422 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 CYBAP13498 195 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRR20EP86478 221 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRR20CP86479 221 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRR20DP86480 221 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRR20BP86481 221 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PRR20AP86496 221 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
LINC00342-202ENST00000448494 KLF17Q5JT82 389 aaPredicted RBP8.68□□□□□ -1.02
LINC00342-202ENST00000448494 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 PLPPR2Q96GM1 343 aa8.68□□□□□ -1.02
LINC00342-202ENST00000448494 LTBP2Q14767 1821 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 TRAV24A0A0B4J272 114 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 A0A1W2PQF6 199 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 DUSP14O95147 198 aaKnown RBP8.67□□□□□ -1.02
LINC00342-202ENST00000448494 ORM2P19652 201 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 ZNF77Q15935 545 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 SLC25A53Q5H9E4 307 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 FADS6Q8N9I5 356 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 PRSS22Q9GZN4 317 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 PHPT1Q9NRX4 125 aaPredicted RBP8.67□□□□□ -1.02
LINC00342-202ENST00000448494 GON4LQ3T8J9 2241 aa8.67□□□□□ -1.02
LINC00342-202ENST00000448494 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
LINC00342-202ENST00000448494 NDUFA7O95182 113 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 LINC00271P0C7V0 271 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
LINC00342-202ENST00000448494 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 C1orf159Q96HA4 380 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 SLC25A2Q9BXI2 301 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 ACTL6BO94805 426 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 HBDP02042 147 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 CRYGBP07316 175 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 PSMB2P49721 201 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 ZNF137PP52743 207 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 TNFAIP6P98066 277 aaPredicted RBP8.66□□□□□ -1.02
LINC00342-202ENST00000448494 HES1Q14469 280 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 TMEM196Q5HYL7 178 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 LINC00596Q86U02 117 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 TMEM219Q86XT9 240 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 ANKRD29Q8N6D5 301 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 BAALCQ8WXS3 180 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
LINC00342-202ENST00000448494 UNC80Q8N2C7 3258 aa8.66□□□□□ -1.02
LINC00342-202ENST00000448494 EMP1P54849 157 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 OR1C1Q15619 314 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 CCL14Q16627 93 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 TSACCQ96A04 125 aaPredicted RBP8.65□□□□□ -1.02
LINC00342-202ENST00000448494 ZNF492Q9P255 531 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 PROCRQ9UNN8 238 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 MYOFQ9NZM1 2061 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 UBE2D3P61077 147 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 UBE2D2P62837 147 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 MBNL2Q5VZF2 373 aaKnown RBP8.65□□□□□ -1.02
LINC00342-202ENST00000448494 HCSTQ9UBK5 93 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms