RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 F2Z2F3 143 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 RPL27AP46776 148 aaKnown RBP11.82□□□□□ -0.52
SF1-211ENST00000448404 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 FAM168AQ92567 244 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 TFPI2P48307 235 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 PDLIM4P50479 330 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
SF1-211ENST00000448404 MMDQ15546 238 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 KIAA1644Q3SXP7 199 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 C10orf113Q5VZT2 155 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 BCL6BQ8N143 479 aaPredicted RBP11.81□□□□□ -0.52
SF1-211ENST00000448404 ZNF596Q8TC21 504 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 LPAR2Q9HBW0 351 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 TNFRSF19Q9NS68 423 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 FAM208BQ5VWN6 2430 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 TCF21O43680 179 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 MT-CO2P00403 227 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 GNG4P50150 75 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 HES1Q14469 280 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 GBGT1Q8N5D6 347 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 ST6GALNAC3Q8NDV1 305 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 VSTM2AQ8TAG5 236 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 SERTAD4Q9NUC0 356 aa11.81□□□□□ -0.52
SF1-211ENST00000448404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.522e-8■■■■□ 23.7
SF1-211ENST00000448404 ADMP35318 185 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 ZNF137PP52743 207 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 TMEM30BQ3MIR4 351 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 A0A1W2PN81 502 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 IER3P46695 156 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 GAGE1Q13065 139 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 OR8B3Q8NGG8 313 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 OR8B2Q96RD0 313 aa11.8□□□□□ -0.52
SF1-211ENST00000448404 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 TCRBV4S1A1TA0A5B7 111 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 TEX22C9J3V5 150 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 CNIH1O95406 144 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 ZFP36P26651 326 aaKnown RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 CNN1P51911 297 aaKnown RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 KCNIP4Q6PIL6 250 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 CUBNO60494 3623 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 LINC00614P0C842 121 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 BRS3P32247 399 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 MC5RP33032 325 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 PRRX1P54821 245 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 M0QZK8 103 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 ISLRO14498 428 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 LCN2P80188 198 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
SF1-211ENST00000448404 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 UBTD1Q9HAC8 227 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 PAM16Q9Y3D7 125 aa11.79□□□□□ -0.52
SF1-211ENST00000448404 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 SH2D7A6NKC9 451 aaPredicted RBP11.78□□□□□ -0.52
SF1-211ENST00000448404 FSTL3O95633 263 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 SRP14P37108 136 aaKnown RBP11.78□□□□□ -0.52
SF1-211ENST00000448404 COMPP49747 757 aaPredicted RBP11.78□□□□□ -0.52
SF1-211ENST00000448404 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 V9GYV3 84 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 CORTO00230 105 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 RBP4P02753 201 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 CRYGBP07316 175 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 LYZP61626 148 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 CACNG8Q8WXS5 425 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
SF1-211ENST00000448404 LGALS7P47929 136 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 FXYD5Q96DB9 178 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 FBXL19-AS1Q494R0 122 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 TIGITQ495A1 244 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 WNT10AQ9GZT5 417 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 RAB1BQ9H0U4 201 aa11.77□□□□□ -0.53
SF1-211ENST00000448404 LIPFP07098 398 aa11.76□□□□□ -0.53
SF1-211ENST00000448404 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
SF1-211ENST00000448404 TAS2R45P59539 299 aa11.76□□□□□ -0.53
SF1-211ENST00000448404 PSG1P11464 419 aa11.76□□□□□ -0.53
SF1-211ENST00000448404 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
SF1-211ENST00000448404 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms