RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 VIRMAQ69YN4 1812 aaKnown RBP2.2□□□□□ -2.06
PMS1-216ENST00000447734 C7orf71A4D174 169 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 RFPL4AA6NLU0 287 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 RFPL4AL1F8VTS6 287 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 DPM2O94777 84 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 OR2H2O95918 312 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 SCTP09683 121 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 MPC1LP0DKB6 136 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 HLA-EP13747 358 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 FXYD2P54710 66 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 HBBP68871 147 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 MYL5Q02045 173 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 DEFB134Q4QY38 66 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 MORN2Q502X0 79 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 PDZD9Q8IXQ8 264 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 TCTE3Q8IZS6 198 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 ZNF714Q96N38 554 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 MYH7BA7E2Y1 1941 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 PTPRSQ13332 1948 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 UBR2Q8IWV8 1755 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 TRPM6Q9BX84 2022 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 CCDC88AQ3V6T2 1871 aa2.2□□□□□ -2.06
PMS1-216ENST00000447734 XIRP1Q702N8 1843 aaKnown RBP2.19□□□□□ -2.06
PMS1-216ENST00000447734 IGHV1-18A0A0C4DH31 117 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 TRBV10-2A0A0K0K1G8 114 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 C5orf58C9J3I9 102 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 J3QQQ9 107 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 HIST1H2BKO60814 126 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 SULT1C4O75897 302 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 HIST1H2BJP06899 126 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 HTR1AP08908 422 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 RPL35P42766 123 aaKnown RBP2.19□□□□□ -2.06
PMS1-216ENST00000447734 RELAQ04206 551 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 FAM27BQ5VT28 67 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 RPL13AP3Q6NVV1 102 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 C4orf22Q6V702 233 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 LINC00305Q7Z4B0 112 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 SH2D6Q7Z4S9 175 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 OR4E2Q8NGC2 313 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 HS3ST2Q9Y278 367 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 MED23Q9ULK4 1368 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 SHANK3Q9BYB0 1731 aa2.19□□□□□ -2.06
PMS1-216ENST00000447734 ADGBQ8N7X0 1667 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 CCDC171Q6TFL3 1326 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 IGHV3-64A0A075B6Q5 118 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 IGHV1-58A0A0C4DH39 117 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 A0A1B0GW64 132 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 LRCOL1A6NCL2 159 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 G3V3Q6 166 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 K7EP13 123 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 C1QCP02747 245 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 P0DMU3 169 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 FAM231AP0DMU4 169 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 FAM231CP0DMU5 169 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 LINC00315P59091 139 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 HIST1H1AQ02539 215 aaPredicted RBP2.18□□□□□ -2.06
PMS1-216ENST00000447734 LY6EQ16553 131 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 NDUFA5Q16718 116 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 LCN15Q6UWW0 184 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 SOSTDC1Q6X4U4 206 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 PHF5AQ7RTV0 110 aaKnown RBP2.18□□□□□ -2.06
PMS1-216ENST00000447734 SLC30A7Q8NEW0 376 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 WFDC11Q8NEX6 87 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 TSTD1Q8NFU3 115 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 OR51A4Q8NGJ6 313 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 AQP3Q92482 292 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 MRPS24Q96EL2 167 aaKnown RBP2.18□□□□□ -2.06
PMS1-216ENST00000447734 CGREF1Q99674 301 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 SMIM3Q9BZL3 60 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 U3KQ87 197 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 GREB1Q4ZG55 1949 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 OBSL1O75147 1896 aa2.18□□□□□ -2.06
PMS1-216ENST00000447734 NUP210Q8TEM1 1887 aaPredicted RBP2.18□□□□□ -2.06
PMS1-216ENST00000447734 CACNA1DQ01668 2161 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 HEATR5AQ86XA9 2040 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 TRBV7-6A0A0J9YX20 115 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 LOC107984640A0A0U1RRK4 108 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 K7ERJ3 54 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 M0R2Z0 102 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 IFNA4P05014 189 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 PAEPP09466 180 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 METTL15P1P0C7V9 234 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 CRYGAP11844 174 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 COX6A1P12074 109 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 EVI2AP22794 236 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 DYNLT1P63172 113 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 AAED1Q7RTV5 226 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 TEX29Q8N6K0 151 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 OR5D16Q8NGK9 328 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 OR4K15Q8NH41 348 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 CMTM2Q8TAZ6 248 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 CYTL1Q9NRR1 136 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 NHP2Q9NX24 153 aaKnown RBP2.17□□□□□ -2.06
PMS1-216ENST00000447734 BAIAP2Q9UQB8 552 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 RFX7Q2KHR2 1363 aa2.17□□□□□ -2.06
PMS1-216ENST00000447734 A2MP01023 1474 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms