RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PSG1P11464 419 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 MIFP14174 115 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 AP2S1P53680 142 aaPredicted RBP13.19□□□□□ -0.3
COL9A1-205ENST00000447041 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 U3KQ87 197 aa13.19□□□□□ -0.3
COL9A1-205ENST00000447041 NOL3O60936 208 aaKnown RBP13.18□□□□□ -0.3
COL9A1-205ENST00000447041 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
COL9A1-205ENST00000447041 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
COL9A1-205ENST00000447041 HRH4Q9H3N8 390 aa13.18□□□□□ -0.3
COL9A1-205ENST00000447041 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-205ENST00000447041 ANXA3P12429 323 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PRR20EP86478 221 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PRR20CP86479 221 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PRR20DP86480 221 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PRR20BP86481 221 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PRR20AP86496 221 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 OR1S1Q8NH92 325 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 MCFD2Q8NI22 146 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 TRIM63Q969Q1 353 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
COL9A1-205ENST00000447041 IGKV1D-37A0A075B6S9 117 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 IGLL5B9A064 214 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 SRPXP78539 464 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 ZNF90Q03938 601 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 KLF9Q13886 244 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-205ENST00000447041 Q6ZTC4 211 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 TBC1D24Q9ULP9 559 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 DNAH6Q9C0G6 4158 aa13.16□□□□□ -0.3
COL9A1-205ENST00000447041 ZFP92A6NM28 416 aa13.15□□□□□ -0.3
COL9A1-205ENST00000447041 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
COL9A1-205ENST00000447041 GAMTQ14353 236 aa13.15□□□□□ -0.3
COL9A1-205ENST00000447041 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
COL9A1-205ENST00000447041 H3BMM0 161 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 PITX3O75364 302 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 IAPPP10997 89 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
COL9A1-205ENST00000447041 TCTAP57738 103 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 DEFB1P60022 68 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 SEPSECSQ9HD40 501 aaKnown RBP13.14□□□□□ -0.31
COL9A1-205ENST00000447041 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
COL9A1-205ENST00000447041 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 GPX4P36969 197 aaPredicted RBP13.13□□□□□ -0.31
COL9A1-205ENST00000447041 LYZP61626 148 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 PYDC2Q56P42 97 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 TOMM5Q8N4H5 51 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 WDR12Q9GZL7 423 aaKnown RBP13.13□□□□□ -0.31
COL9A1-205ENST00000447041 V9GYH0 126 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
COL9A1-205ENST00000447041 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
COL9A1-205ENST00000447041 VAMP1P23763 118 aa13.12□□□□□ -0.31
COL9A1-205ENST00000447041 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
COL9A1-205ENST00000447041 ZNF79Q15937 498 aa13.12□□□□□ -0.31
COL9A1-205ENST00000447041 ZNF767PQ75MW2 155 aa13.12□□□□□ -0.31
COL9A1-205ENST00000447041 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
COL9A1-205ENST00000447041 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-205ENST00000447041 NKX2-1P43699 371 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-205ENST00000447041 ATP5IP56385 69 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-205ENST00000447041 AP3S2P59780 193 aa13.11□□□□□ -0.31
COL9A1-205ENST00000447041 OR2F1Q13607 317 aa13.11□□□□□ -0.31
COL9A1-205ENST00000447041 C1QTNF4Q9BXJ3 329 aa13.11□□□□□ -0.31
COL9A1-205ENST00000447041 PAIP2BQ9ULR5 123 aaKnown RBP13.11□□□□□ -0.31
COL9A1-205ENST00000447041 HECTD4Q9Y4D8 3996 aa13.11□□□□□ -0.31
COL9A1-205ENST00000447041 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 IGKV1OR2-108A0A075B7D4 117 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 FXYD7P58549 80 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 LRTM2Q8N967 370 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 LINC00052Q96N35 136 aa13.1□□□□□ -0.31
COL9A1-205ENST00000447041 PIGBOS1A0A0B4J2F0 54 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 SOCS3O14543 225 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 RAB11AP62491 216 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 TRGV9Q99603 122 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 MAGT1Q9H0U3 335 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
COL9A1-205ENST00000447041 PFDN2Q9UHV9 154 aa13.09□□□□□ -0.31
COL9A1-205ENST00000447041 SNRPGP15A8MWD9 76 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 SFT2D2O95562 160 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 FABP1P07148 127 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 SLC25A6P12236 298 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 PSMB3P49720 205 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 C1orf194Q5T5A4 169 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 THAP8Q8NA92 274 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.32
COL9A1-205ENST00000447041 PRSS46E5RG02 174 aa13.07□□□□□ -0.32
COL9A1-205ENST00000447041 HOXB5P09067 269 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms