RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CD99P14209 185 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 OR5B12Q96R08 314 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 RASL11BQ9BPW5 248 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 S4R3C0 116 aa13.76□□□□□ -0.21
SMC6-206ENST00000446852 TRGC2P03986 189 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 S100A6P06703 90 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 BRS3P32247 399 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 TTC9CQ8N5M4 171 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 SFRP2Q96HF1 295 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 IGHV3OR16-10A0A075B7F0 116 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
SMC6-206ENST00000446852 HELTA6NFD8 242 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 LYZP61626 148 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 LEMD1Q68G75 181 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 TSPAN9O75954 239 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 HLA-DRB1P01911 266 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 S100PP25815 95 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 CENPWQ5EE01 88 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 C1RLQ9NZP8 487 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 POLQO75417 2590 aa13.74□□□□□ -0.21
SMC6-206ENST00000446852 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 A0A1W2PPQ1 181 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 GP9P14770 177 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 RD3LP0DJH9 198 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 ZNF329Q86UD4 541 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 LY96Q9Y6Y9 160 aa13.73□□□□□ -0.21
SMC6-206ENST00000446852 UBE2CO00762 179 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 SRP14P37108 136 aaKnown RBP13.72□□□□□ -0.21
SMC6-206ENST00000446852 GNG4P50150 75 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 AKR1D1P51857 326 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 TRAV40A0A0B4J280 105 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 F8W735 103 aaPredicted RBP13.72□□□□□ -0.21
SMC6-206ENST00000446852 PHOX2AO14813 284 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 GGCTO75223 188 aaKnown RBP13.72□□□□□ -0.21
SMC6-206ENST00000446852 MYCNOSP40205 109 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 FAM3BP58499 235 aaPredicted RBP13.72□□□□□ -0.21
SMC6-206ENST00000446852 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
SMC6-206ENST00000446852 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 PPP1R2P9O14990 202 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BKO60814 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BJP06899 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BOP23527 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BBP33778 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BDP58876 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BCP62807 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 FABP9Q0Z7S8 132 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST2H2BEQ16778 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.71□□□□□ -0.21
SMC6-206ENST00000446852 BLNKQ8WV28 456 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BHQ93079 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BNQ99877 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 HIST1H2BMQ99879 126 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 SLC25A39Q9BZJ4 359 aaPredicted RBP13.71□□□□□ -0.21
SMC6-206ENST00000446852 AP4M1O00189 453 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 RANP62826 216 aaKnown RBP13.71□□□□□ -0.21
SMC6-206ENST00000446852 OR5I1Q13606 314 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 FRZBQ92765 325 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 IGF2BP2-AS1Q96M15 143 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 LINC00479Q96M42 142 aa13.71□□□□□ -0.21
SMC6-206ENST00000446852 MRPL27Q9P0M9 148 aaKnown RBP13.71□□□□□ -0.21
SMC6-206ENST00000446852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.71□□□□□ -0.226e-8■■■■■ 33.6
SMC6-206ENST00000446852 A1L4Q6 167 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 NDUFB8O95169 186 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 OR10G8Q8NGN5 311 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 SH2D7A6NKC9 451 aaPredicted RBP13.7□□□□□ -0.22
SMC6-206ENST00000446852 TOMM40O96008 361 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 IGLV2-8P01709 118 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 NBEAP1P0C6P0 100 aa13.7□□□□□ -0.22
SMC6-206ENST00000446852 H3BTX0 84 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 GNG7O60262 68 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 OR2J3O76001 311 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 KCNIP4Q6PIL6 250 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 ZNF491Q8N8L2 437 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 ZNF48Q96MX3 618 aaPredicted RBP13.69□□□□□ -0.22
SMC6-206ENST00000446852 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 TGOLN2O43493 480 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 IGHV4-38-2P0DP08 117 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 MFAP4P55083 255 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 ZNF600Q6ZNG1 722 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
SMC6-206ENST00000446852 LINC01548A6NM66 108 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 PPP5D1E7EU14 171 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 SLC17A3O00476 420 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 PEX7O00628 323 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 FABP1P07148 127 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 MSMBP08118 114 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 TRGC1P0CF51 173 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 COX6B1P14854 86 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 GNG5P63218 68 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
SMC6-206ENST00000446852 IMMP2LQ96T52 175 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms