RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SCGB1D1O95968 90 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 NCBP2LA6PVI3 153 aaKnown RBP13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 PFN1P07737 140 aaKnown RBP13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 GZMBP10144 247 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 OR4A5Q8NH83 315 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 CTDSP1Q9GZU7 261 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 IGKV1D-37A0A075B6S9 117 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 CD33P20138 364 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 C10orf113Q5VZT2 155 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 HIST1H2BLQ99880 126 aa13.43□□□□□ -0.26
LAPTM4B-201ENST00000445593 MAS1LP35410 378 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 COMPP49747 757 aaPredicted RBP13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 USP24Q9UPU5 2620 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 VENTXO95231 258 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 C8orf88P0DMB2 117 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 TPTE2P1Q5T6R2 138 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 BEND2Q8NDZ0 799 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 SGMS2Q8NHU3 365 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 DPM3Q9P2X0 92 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 DOPEY1Q5JWR5 2465 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 MGST1P10620 155 aaKnown RBP13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 TEX45Q8NA69 505 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 AMMECR1Q9Y4X0 333 aaPredicted RBP13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 SELENOKQ9Y6D0 94 aa13.42□□□□□ -0.26
LAPTM4B-201ENST00000445593 TRAV34A0A0B4J273 112 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZNF320A2RRD8 509 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 K7EN84 100 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 RBP4P02753 201 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 SLC35B1P78383 322 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 FXYD3Q14802 87 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 TEX38Q6PEX7 206 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 IGHV3OR16-10A0A075B7F0 116 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 TAS2R45P59539 299 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 CENPWQ5EE01 88 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 TNFRSF14Q92956 283 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 BPESC1Q9GZL8 116 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 TMEM242Q9NWH2 141 aa13.41□□□□□ -0.26
LAPTM4B-201ENST00000445593 TCRBV4S1A1TA0A5B7 111 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZNF705FA8MVS1 300 aaPredicted RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZNF705DP0CH99 300 aaPredicted RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZNF705BP0CI00 300 aaPredicted RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 RANP62826 216 aaKnown RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 NEU4Q8WWR8 484 aaPredicted RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 TEX22C9J3V5 150 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 TCL1AP56279 114 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 LYZP61626 148 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 GNG5P63218 68 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 MRPL41Q8IXM3 137 aaKnown RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 WNT10AQ9GZT5 417 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 RNASE7Q9H1E1 156 aaKnown RBP13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 TMEM167BQ9NRX6 74 aa13.4□□□□□ -0.26
LAPTM4B-201ENST00000445593 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 IGHV3-23P01764 117 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 ERVFC1-1P60608 527 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 HELTA6NFD8 242 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 LY6G5BQ8NDX9 201 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 ANAPC16Q96DE5 110 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 FAM167A-AS1Q96KT0 104 aa13.39□□□□□ -0.27
LAPTM4B-201ENST00000445593 C20orf202A1L168 122 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 GNG4P50150 75 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 SH2D7A6NKC9 451 aaPredicted RBP13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 CRYGBP07316 175 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 OR10G8Q8NGN5 311 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 EAF1Q96JC9 268 aaPredicted RBP13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 LY6LH3BQJ8 138 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 LINC00614P0C842 121 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 C8orf46Q8TAG6 207 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 SERTAD4Q9NUC0 356 aa13.38□□□□□ -0.27
LAPTM4B-201ENST00000445593 FRMD6-AS1P0C7T7 363 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 PRR31Q5SQ13 230 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 PRR27Q6MZM9 219 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 PTPN13Q12923 2485 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 A0A1B0GUS0 222 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 NBR2O15453 112 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 CA1P00915 261 aaPredicted RBP13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 TIGITQ495A1 244 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 DTX2Q86UW9 622 aa13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
LAPTM4B-201ENST00000445593 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms