RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MPTX1A8MV57 137 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 ZNF688P0C7X2 276 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 SPANXN5Q5MJ07 72 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 RNF125Q96EQ8 232 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 C20orf85Q9H1P6 137 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 TP53TG1Q9Y2A0 90 aa15.54■□□□□ 0.08
CDKN3-204ENST00000442975 SACSQ9NZJ4 4579 aa15.53■□□□□ 0.08
CDKN3-204ENST00000442975 LYRM1O43325 122 aa15.53■□□□□ 0.08
CDKN3-204ENST00000442975 ZNF90Q03938 601 aa15.53■□□□□ 0.08
CDKN3-204ENST00000442975 GLMPQ8WWB7 406 aa15.53■□□□□ 0.08
CDKN3-204ENST00000442975 U3KQE9 123 aa15.53■□□□□ 0.08
CDKN3-204ENST00000442975 K7EQG2 157 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 FABP1P07148 127 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 LYZP61626 148 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 POLR2GP62487 172 aaKnown RBP eCLIP15.52■□□□□ 0.08
CDKN3-204ENST00000442975 OR2F1Q13607 317 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 C16orf54Q6UWD8 224 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 IL17DQ8TAD2 202 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 CSTL1Q9H114 145 aa15.52■□□□□ 0.08
CDKN3-204ENST00000442975 CSMD3Q7Z407 3707 aa15.52■□□□□ 0.07
CDKN3-204ENST00000442975 IGKV1D-37A0A075B6S9 117 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 A0A0J9YWU9 116 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 PLA2G10O15496 165 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 SSSCA1O60232 199 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 SCGB1D2O95969 90 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 RNF183Q96D59 192 aa15.51■□□□□ 0.07
CDKN3-204ENST00000442975 STRAPQ9Y3F4 350 aaKnown RBP15.51■□□□□ 0.07
CDKN3-204ENST00000442975 CA1P00915 261 aaPredicted RBP15.5■□□□□ 0.07
CDKN3-204ENST00000442975 NUP62P37198 522 aaPredicted RBP15.5■□□□□ 0.07
CDKN3-204ENST00000442975 NKX2-1P43699 371 aaPredicted RBP15.5■□□□□ 0.07
CDKN3-204ENST00000442975 AKR1C1Q04828 323 aa15.5■□□□□ 0.07
CDKN3-204ENST00000442975 IAH1Q2TAA2 248 aaPredicted RBP15.5■□□□□ 0.07
CDKN3-204ENST00000442975 STHQ8IWL8 128 aa15.5■□□□□ 0.07
CDKN3-204ENST00000442975 DCANP1Q8TF63 244 aa15.5■□□□□ 0.07
CDKN3-204ENST00000442975 CCDC32Q9BV29 185 aa15.5■□□□□ 0.07
CDKN3-204ENST00000442975 RYR2Q92736 4967 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 TRAV6A0A075B6T7 132 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 AP2S1P53680 142 aaPredicted RBP15.49■□□□□ 0.07
CDKN3-204ENST00000442975 CNPY1Q3B7I2 92 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 PSMG4Q5JS54 123 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 SIGLEC15Q6ZMC9 328 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 ACOT7LQ6ZUV0 252 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 OR4D5Q8NGN0 318 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 PPP1R14BQ96C90 147 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 NUDT15Q9NV35 164 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 PFDN2Q9UHV9 154 aa15.49■□□□□ 0.07
CDKN3-204ENST00000442975 SMCO3A2RU48 225 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 KNCNA6PVL3 124 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 BUB3O43684 328 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 OR8G2PQ6IF36 304 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 MITD1Q8WV92 249 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 TRGV9Q99603 122 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 PSENENQ9NZ42 101 aa15.48■□□□□ 0.07
CDKN3-204ENST00000442975 IGKV1OR2-108A0A075B7D4 117 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 SNRPGP15A8MWD9 76 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 PRSS46E5RG02 174 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 ID3Q02535 119 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 PMS2P11Q13670 270 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 ACTL10Q5JWF8 245 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 THAP8Q8NA92 274 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 NRN1Q9NPD7 142 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 GSKIPQ9P0R6 139 aa15.47■□□□□ 0.07
CDKN3-204ENST00000442975 CXorf65A6NEN9 183 aa15.46■□□□□ 0.07
CDKN3-204ENST00000442975 CCSO14618 274 aa15.46■□□□□ 0.07
CDKN3-204ENST00000442975 TCRBP04435 133 aa15.46■□□□□ 0.07
CDKN3-204ENST00000442975 SNRPD3P62318 126 aaKnown RBP15.46■□□□□ 0.07
CDKN3-204ENST00000442975 ZBTB8BQ8NAP8 495 aaPredicted RBP15.46■□□□□ 0.07
CDKN3-204ENST00000442975 SEC22CQ9BRL7 303 aa15.45■□□□□ 0.06
CDKN3-204ENST00000442975 TENM2Q9NT68 2774 aa15.45■□□□□ 0.06
CDKN3-204ENST00000442975 LCE6AA0A183 80 aa15.44■□□□□ 0.06
CDKN3-204ENST00000442975 FAM25EA8MYX2 175 aa15.44■□□□□ 0.06
CDKN3-204ENST00000442975 EWSR1Q01844 656 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDKN3-204ENST00000442975 TRPT1Q86TN4 253 aaKnown RBP15.44■□□□□ 0.06
CDKN3-204ENST00000442975 GATAD1Q8WUU5 269 aa15.44■□□□□ 0.06
CDKN3-204ENST00000442975 S100ZQ8WXG8 99 aa15.44■□□□□ 0.06
CDKN3-204ENST00000442975 FAM240BA0A1B0GVZ2 78 aa15.43■□□□□ 0.06
CDKN3-204ENST00000442975 RRAS2P62070 204 aaPredicted RBP15.43■□□□□ 0.06
CDKN3-204ENST00000442975 ZNF846Q147U1 533 aa15.43■□□□□ 0.06
CDKN3-204ENST00000442975 TMEM217Q8N7C4 229 aa15.43■□□□□ 0.06
CDKN3-204ENST00000442975 OR11H2Q8NH07 326 aa15.43■□□□□ 0.06
CDKN3-204ENST00000442975 RARRES2Q99969 163 aa15.43■□□□□ 0.06
CDKN3-204ENST00000442975 CCNKO75909 580 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 METTL15P1P0C7V9 234 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 GATA2P23769 480 aaPredicted RBP15.42■□□□□ 0.06
CDKN3-204ENST00000442975 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 BPIFCQ8NFQ6 507 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 ZNF431Q8TF32 576 aaPredicted RBP15.42■□□□□ 0.06
CDKN3-204ENST00000442975 SMIM8Q96KF7 97 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 RAB40CQ96S21 281 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 FBXL17Q9UF56 701 aa15.42■□□□□ 0.06
CDKN3-204ENST00000442975 RCL1Q9Y2P8 373 aaKnown RBP15.42■□□□□ 0.06
CDKN3-204ENST00000442975 CFDP00746 253 aaPredicted RBP15.41■□□□□ 0.06
CDKN3-204ENST00000442975 H2AFB2P0C5Z0 115 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 ORM2P19652 201 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 C4BPBP20851 252 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 MZT2BQ6NZ67 158 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 OR8I2Q8N0Y5 310 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 OR1B1Q8NGR6 318 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 SLC25A22Q9H936 323 aa15.41■□□□□ 0.06
CDKN3-204ENST00000442975 TBC1D24Q9ULP9 559 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms