RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NDUFA7O95182 113 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 VENTXO95231 258 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CXorf1O96002 111 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100A8P05109 93 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100A9P06702 114 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CXCL1P09341 107 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 STAG3L2P0CL84 134 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 STAG3L3P0CL85 134 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CCL3L1P16619 93 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 USF1P22415 310 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 COL8A2P25067 703 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100PP25815 95 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 LOXP28300 417 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 GPX4P36969 197 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CA7P43166 264 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPL29P47914 159 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 MEOX2P50222 304 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PRRX1P54821 245 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 DLX6P56179 175 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 B2MP61769 119 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RHOBP62745 196 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPL23P62829 140 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPL8P62917 257 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ERHP84090 104 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 FABP9Q0Z7S8 132 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 KLRB1Q12918 225 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 KIAA0141Q14154 515 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ADIRFQ15847 76 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 BSXQ3C1V8 233 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 FBXL19-AS1Q494R0 122 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM155Q4W5P6 130 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 GCSAMLQ5JQS6 135 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF343Q6P1L6 599 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM144Q7Z5S9 345 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PDPNQ86YL7 162 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 Q8N7P7 452 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ST6GALNAC3Q8NDV1 305 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR4C13Q8NGP0 309 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR1L8Q8NGR8 309 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR10X1Q8NGY0 326 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR5B3Q8NH48 314 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR4A5Q8NH83 315 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR9G1Q8NH87 305 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 VSTM2AQ8TAG5 236 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC01560Q8TB33 94 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM167AQ8TBQ9 72 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 Q8WTZ3 238 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPUSD4Q96CM3 377 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 FLYWCH2Q96CP2 140 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 SLC35E1Q96K37 410 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 FAM210BQ96KR6 192 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 NABP2Q9BQ15 211 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 TCEAL7Q9BRU2 100 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 GGTLC1Q9BX51 225 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 MRPL20Q9BYC9 149 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 COMMD5Q9GZQ3 224 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PARLQ9H300 379 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PATZ1Q9HBE1 687 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 METTL1Q9UBP6 276 aaKnown RBP2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 MIOXQ9UGB7 285 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 WASHC3Q9Y3C0 194 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 URGCP-MRPS24S4R325 110 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PCNX2A6NKB5 2137 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 MED12LQ86YW9 2145 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF407Q9C0G0 2248 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 RTTNQ86VV8 2226 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 TRBV24-1A0A075B6N3 115 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 H7BYZ3 331 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 PPP1R2P9O14990 202 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 ENSAO43768 121 aaKnown RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 FCN3O75636 299 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 FSTL3O95633 263 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGLV2-23P01705 113 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV2-5P01817 119 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 TRGC2P03986 189 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGKV1-16P04430 117 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 PFN1P07737 140 aaKnown RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC00869P0C866 280 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 SAA1P0DJI8 122 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 ARL14EPLP0DKL9 152 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV1-8P0DP01 117 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 RNASE2P10153 161 aaKnown RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 GP9P14770 177 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 GCHFRP30047 84 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR10J1P30954 320 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 SRP14P37108 136 aaKnown RBP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 GALR1P47211 349 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 LGALS7P47929 136 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 ATP5G3P48201 142 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 REG1BP48304 166 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 PPOXP50336 477 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 NDUFA6P56556 154 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 UBE2G2P60604 165 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 KIAA1644Q3SXP7 199 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 VMA21Q3ZAQ7 101 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 FAM78BQ5VT40 261 aa2.68□□□□□ -1.98
HMGB3P11-201ENST00000440127 KCNIP4Q6PIL6 250 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms