RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 VMA21Q3ZAQ7 101 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 LCN12Q6JVE5 192 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 TCF24Q7RTU0 167 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 TRBV9A0A0B4J1U6 114 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 IZUMO1RA6ND01 250 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 FSTL3O95633 263 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 RAB4AP20338 218 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 TDGF1P3P51864 188 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 CASP6P55212 293 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 UBE2G1P62253 170 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 LINC00322Q6ZN03 302 aaPredicted RBP10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 C11orf42Q8N5U0 333 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 OR1L4Q8NGR5 311 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 KCNS1Q96KK3 526 aa10.87□□□□□ -0.67
HERPUD1-204ENST00000439977 IGLC7A0M8Q6 106 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 MT-ND6P03923 174 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 RPL19P84098 196 aaKnown RBP10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 TMEM30BQ3MIR4 351 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 OR2D3Q8NGH3 330 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 NEU1Q99519 415 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 TRAV8-1A0A0A6YYK1 113 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 HLA-DQA1P01909 254 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF25P17030 456 aaPredicted RBP10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 TBR1Q16650 682 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 IGF2-ASQ6U949 168 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 Q8NA96 180 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
HERPUD1-204ENST00000439977 M0QZ24 198 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF324O75467 553 aaPredicted RBP10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 SPACA3Q8IXA5 215 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 Q8N976 141 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 LY6HO94772 140 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 NBEAP1P0C6P0 100 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 TFPI2P48307 235 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 C18orf32Q8TCD1 76 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 EPDR1Q9UM22 224 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 ZNF835Q9Y2P0 537 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 TNFRSF13BO14836 293 aaPredicted RBP10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 DLX6P56179 175 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 NIT1Q86X76 327 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 INSIG2Q9Y5U4 225 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 S4R3C0 116 aa10.85□□□□□ -0.67
HERPUD1-204ENST00000439977 IGHV1-69-2A0A0G2JMI3 117 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 RPL27AP46776 148 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 PMCHL1Q16048 86 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 LINC01560Q8TB33 94 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 RNF2Q99496 336 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 ATRXP46100 2492 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 C20orf144Q9BQM9 153 aa10.84□□□□□ -0.67
HERPUD1-204ENST00000439977 ARHGAP32A7KAX9 2087 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 LYZP61626 148 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 IGHV2-26A0A0B4J1V2 119 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 MC5RP33032 325 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 ZNF137PP52743 207 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 TCF15Q12870 199 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 THAP8Q8NA92 274 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 OR4A5Q8NH83 315 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 MBD6Q96DN6 1003 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 PERPQ96FX8 193 aa10.83□□□□□ -0.68
HERPUD1-204ENST00000439977 A0A1W2PRD5 423 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 A0A1W2PRF3 423 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 A0A1W2PRM7 423 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 HYPMO75409 117 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 HSBP1O75506 76 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 PLGLAQ15195 96 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 MMDQ15546 238 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 EXOC3-AS1Q8N2X6 119 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 SIGLEC9Q9Y336 463 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 ANKHD1Q8IWZ3 2542 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 VSTM5A8MXK1 200 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 RBP4P02753 201 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 GRNP28799 593 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 LINC00311Q8N616 119 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 BORCS7Q96B45 105 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
HERPUD1-204ENST00000439977 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 LGALS7P47929 136 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 CLEC7AQ9BXN2 247 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 IGHV1-3A0A0C4DH29 117 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 PSG1P11464 419 aa10.81□□□□□ -0.68
HERPUD1-204ENST00000439977 MYCNOSP40205 109 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms