RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
CPSF7-205ENST00000439958 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 SELENOTP62341 195 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 RHOGP84095 191 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 C15orf32Q32M92 178 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 C21orf62Q9NYP8 219 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 K7EIM0 57 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 PFDN5Q99471 154 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 FAM24BQ8N5W8 94 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 Q8N6K4 173 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 OR5B12Q96R08 314 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 I3L2K1 104 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 CIARTQ8N365 385 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-205ENST00000439958 NF1P21359 2839 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 MFAP4P55083 255 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 FNDC10F2Z333 226 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 TMEM116Q8NCL8 245 aa11.86□□□□□ -0.51
CPSF7-205ENST00000439958 ZNF207O43670 478 aaKnown RBP11.85□□□□□ -0.51
CPSF7-205ENST00000439958 IGLC1P0CG04 106 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 PAX1P15863 534 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 FCGR2BP31994 310 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-205ENST00000439958 CLEC19AQ6UXS0 136 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 PATE2Q6UY27 113 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 OR2C1O95371 312 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 HLA-DRB1P01911 266 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 PF4V1P10720 104 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 CRYBB3P26998 211 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 C5orf56Q8N8D9 126 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 CLN5O75503 358 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 TMEM241Q24JQ0 296 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 PQLC2Q6ZP29 291 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 Q6ZS46 218 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 ZNF114Q8NC26 417 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
CPSF7-205ENST00000439958 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-205ENST00000439958 JMJD1CQ15652 2540 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 C10orf91Q5T1B1 145 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 ZNF343Q6P1L6 599 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 OR51M1Q9H341 326 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 IGKV1-17P01599 117 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 CLEC3BP05452 202 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 EBI3Q14213 229 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 NHLRC2Q8NBF2 726 aa11.84□□□□□ -0.51
CPSF7-205ENST00000439958 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.51
CPSF7-205ENST00000439958 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.51
CPSF7-205ENST00000439958 PSMG3-AS1Q96PY0 264 aa11.83□□□□□ -0.51
CPSF7-205ENST00000439958 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.51
CPSF7-205ENST00000439958 TRGV3P03979 118 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 TRGV9Q99603 122 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 TRAV41A0A0B4J266 112 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 EGR2P11161 476 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-205ENST00000439958 TPPP2P59282 170 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 OR1L6Q8NGR2 347 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 PIFOQ8TCI5 191 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 PITPNC1Q9UKF7 332 aa11.83□□□□□ -0.52
CPSF7-205ENST00000439958 MGST1P10620 155 aaKnown RBP11.82□□□□□ -0.52
CPSF7-205ENST00000439958 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
CPSF7-205ENST00000439958 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 Q8WTZ3 238 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 CRYGCP07315 174 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 MLXQ9UH92 298 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-205ENST00000439958 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 FABP1P07148 127 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 NPPCP23582 126 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 GATA3P23771 443 aa11.82□□□□□ -0.52
CPSF7-205ENST00000439958 NPIPB5A8MRT5 1133 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 PDE6DO43924 150 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 GNG5P63218 68 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 RNF212Q495C1 297 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 RNF125Q96EQ8 232 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 ZNF503Q96F45 646 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 LINC00479Q96M42 142 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 CHRDL1Q9BU40 450 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms