RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SERF2P84101 59 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PRR20EP86478 221 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PRR20CP86479 221 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PRR20DP86480 221 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PRR20BP86481 221 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PRR20AP86496 221 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 OR51G1Q8NGK1 321 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 SLC39A9Q9NUM3 307 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 KRTAP10-3P60369 221 aa15.95■□□□□ 0.14
CHD3-204ENST00000439235 FFAR4Q5NUL3 377 aa15.95■□□□□ 0.14
CHD3-204ENST00000439235 Q6ZRG5 221 aa15.95■□□□□ 0.14
CHD3-204ENST00000439235 NDUFA11Q86Y39 141 aa15.95■□□□□ 0.14
CHD3-204ENST00000439235 A0A1W2PRX2 142 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 OR2C1O95371 312 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 ZP3P21754 424 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 GATA2P23769 480 aaPredicted RBP15.94■□□□□ 0.14
CHD3-204ENST00000439235 ELLP55199 621 aaPredicted RBP15.94■□□□□ 0.14
CHD3-204ENST00000439235 PXDC1Q5TGL8 231 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 C18orf65Q6ZTR6 163 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 TMED6Q8WW62 240 aa15.94■□□□□ 0.14
CHD3-204ENST00000439235 PUS1Q9Y606 427 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHD3-204ENST00000439235 IGHV4OR15-8A0A075B7B6 117 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 A0A087WW49 117 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 NDUFA4O00483 81 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 MBP02144 154 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 RPEL1Q2QD12 228 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 ACOT6Q3I5F7 207 aaPredicted RBP15.93■□□□□ 0.14
CHD3-204ENST00000439235 AKR1C8PQ5T2L2 129 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 TMEM182Q6ZP80 229 aaPredicted RBP15.93■□□□□ 0.14
CHD3-204ENST00000439235 C8orf86Q6ZUL3 223 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 DPF1Q92782 380 aa15.93■□□□□ 0.14
CHD3-204ENST00000439235 LINC01619G3V211 115 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 YIF1AO95070 293 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 IL4P05112 153 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 LYZP61626 148 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 OR1L4Q8NGR5 311 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 OR1N2Q8NGR9 330 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 RNF125Q96EQ8 232 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 RFNGQ9Y644 331 aa15.92■□□□□ 0.14
CHD3-204ENST00000439235 IGHV3-35A0A0C4DH35 117 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 WI2-2373I1.2A0A1W2PRP0 233 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 UMAD1C9J7I0 102 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 PLP1P60201 277 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 DEFB136Q30KP8 78 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 FAM106AQ4KMX7 169 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 HIST2H2BDQ6DRA6 164 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 TEX261Q6UWH6 196 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 ALKAL2Q6UX46 152 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 TOMM20LQ6UXN7 152 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 OR11H1Q8NG94 326 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 PFDN5Q99471 154 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 CITED1Q99966 193 aa15.91■□□□□ 0.14
CHD3-204ENST00000439235 COX7A2P2O60397 106 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 IFNA7P01567 189 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 M6PRP20645 277 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 NSUN5P1Q3KNT7 163 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 TMEM41BQ5BJD5 291 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 C12orf54Q6X4T0 127 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 S100A7AQ86SG5 101 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 GPHB5Q86YW7 130 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 OR1B1Q8NGR6 318 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 PBDC1Q9BVG4 233 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 ZFAND3Q9H8U3 227 aa15.9■□□□□ 0.14
CHD3-204ENST00000439235 ELOA3CA0A087WX78 387 aaPredicted RBP15.89■□□□□ 0.13
CHD3-204ENST00000439235 ADARB2-AS1A8MUL3 147 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 HYPMO75409 117 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 OR5G3P0C626 314 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 ORM2P19652 201 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 HOXD3P31249 432 aaPredicted RBP15.89■□□□□ 0.13
CHD3-204ENST00000439235 RAB5CP51148 216 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 GATAD1Q8WUU5 269 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 TMEM190Q8WZ59 177 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 ZNF414Q96IQ9 312 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 DOK5Q9P104 306 aa15.89■□□□□ 0.13
CHD3-204ENST00000439235 JMJD1CQ15652 2540 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 CCL24O00175 119 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 S100A7P31151 101 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 RAB2AP61019 212 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 C10orf113Q5VZT2 155 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 C1QL4Q86Z23 238 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 ZNF680Q8NEM1 530 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 OR10G4Q8NGN3 311 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 OR10G9Q8NGN4 311 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 OR10G7Q8NGN6 311 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 RCC1LQ96I51 464 aaKnown RBP15.88■□□□□ 0.13
CHD3-204ENST00000439235 RAX2Q96IS3 184 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 RNF2Q99496 336 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 C20orf24Q9BUV8 137 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 ZNF747Q9BV97 191 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 HIGD1AQ9Y241 93 aa15.88■□□□□ 0.13
CHD3-204ENST00000439235 SULT1A2P50226 295 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 FHL3Q13643 280 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 USF2Q15853 346 aaPredicted RBP15.87■□□□□ 0.13
CHD3-204ENST00000439235 DPPA3Q6W0C5 159 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 REC114Q7Z4M0 266 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 DNAJC4Q9NNZ3 241 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 UBQLN2Q9UHD9 624 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 RABAC1Q9UI14 185 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 UFC1Q9Y3C8 167 aa15.87■□□□□ 0.13
CHD3-204ENST00000439235 ZNF320A2RRD8 509 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms