RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 DUX5Q96PT3 197 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 ATG101Q9BSB4 218 aa10.02□□□□□ -0.8
TCOF1-205ENST00000439160 A0A1W2PRE2 83 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 LYL1P12980 280 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 C5orf64Q2M2E5 130 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 MYOZ3Q8TDC0 251 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 SELENOKQ9Y6D0 94 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 RPS20P60866 119 aaKnown RBP10.02□□□□□ -0.81
TCOF1-205ENST00000439160 HBBP68871 147 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 C15orf32Q32M92 178 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 TMEM155Q4W5P6 130 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 SPTBN4Q9H254 2564 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 ANKRD11Q6UB99 2663 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-205ENST00000439160 NAV2Q8IVL1 2488 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 H3BUX3 64 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 CEACAM4O75871 244 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 IGKV1-39P01597 117 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 IGKV1D-39P04432 117 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
TCOF1-205ENST00000439160 TAS2R60P59551 318 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 REC114Q7Z4M0 266 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 C11orf44Q8N8P7 122 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
TCOF1-205ENST00000439160 A0A087WWC5 75 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 UBE2CO00762 179 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 C3orf36Q3SXR2 165 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 C19orf35Q6ZS72 473 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 Q8TCH9 128 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 TCF21O43680 179 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 CXCL1P09341 107 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 PRTN3P24158 256 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 TMEM183AQ8IXX5 376 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 LAMA3Q16787 3333 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-205ENST00000439160 C17orf58Q2M2W7 97 aa10.01□□□□□ -0.81
TCOF1-205ENST00000439160 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
TCOF1-205ENST00000439160 M0QZK8 103 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 M0R1W7 72 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 LOXP28300 417 aaPredicted RBP10□□□□□ -0.81
TCOF1-205ENST00000439160 CFHR2P36980 270 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 ZNF134P52741 427 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 DERL1Q9BUN8 251 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 B4DSR2 109 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 M0R381 172 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 FAM159AQ6UWV7 190 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 AGMATQ9BSE5 352 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 PMS2P5A8MQ11 134 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 HIGD1CA8MV81 97 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 TCF23Q7RTU1 214 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 MYO9AB2RTY4 2548 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 TRAV1-1A0A0B4J248 108 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 SAA4P35542 130 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 IGF2-ASQ6U949 168 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 SCRT1Q9BWW7 348 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 OTORQ9NRC9 128 aa10□□□□□ -0.81
TCOF1-205ENST00000439160 KIAA1549LQ6ZVL6 1849 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 TRAV41A0A0B4J266 112 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 NPFFO15130 113 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-205ENST00000439160 RNASE2P10153 161 aaKnown RBP9.99□□□□□ -0.81
TCOF1-205ENST00000439160 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 GLMPQ8WWB7 406 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 FMC1Q96HJ9 113 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 KLK15Q9H2R5 256 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
TCOF1-205ENST00000439160 C9JCJ5 164 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 Q1RN00 199 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 C11orf53Q8IXP5 236 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 A0A1B0GWJ7 208 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 C15orf65H3BRN8 121 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 TCF24Q7RTU0 167 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 OR4X2Q8NGF9 303 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 RAX2Q96IS3 184 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
TCOF1-205ENST00000439160 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
TCOF1-205ENST00000439160 TRBV9A0A0B4J1U6 114 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 A0A1B0GUT8 65 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 OOSP1A8MZH6 123 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 PAX9P55771 341 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 RNF5Q99942 180 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 A0A1W2PPI3 338 aa9.98□□□□□ -0.81
TCOF1-205ENST00000439160 SOD3P08294 240 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms