RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PMCHP20382 165 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 LGALS4P56470 323 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 FXYD3Q14802 87 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 MMD2Q8IY49 270 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 A0A1W2PN81 502 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 C22orf46C9J442 243 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 ESDP10768 282 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 CNTFRP26992 372 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 CRYBB3P26998 211 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 FAM19A2Q8N3H0 131 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 LINC00614P0C842 121 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 ZNF137PP52743 207 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 VMA21Q3ZAQ7 101 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 ZNF843Q8N446 348 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 CBY1Q9Y3M2 126 aa11.12□□□□□ -0.63
PTCHD3-201ENST00000438700 IGHV2-26A0A0B4J1V2 119 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 OR5G3P0C626 314 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 ONECUT1Q9UBC0 465 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 V9GYV3 84 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 COX7A1P24310 79 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 CTRLP40313 264 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 AMTP48728 403 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 EFNA4P52798 201 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 EAF1Q96JC9 268 aaPredicted RBP11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
PTCHD3-201ENST00000438700 AREGP15514 252 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 PQLC2Q6ZP29 291 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 LY6G5BQ8NDX9 201 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 SSBP3Q9BWW4 388 aaPredicted RBP11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 KMT2BQ9UMN6 2715 aaPredicted RBP11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 A0A1W2PS18 150 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 LIPFP07098 398 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 MC5RP33032 325 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 TAS2R45P59539 299 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 SUMO1P63165 101 aaKnown RBP11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 RUSC1-AS1Q66K80 236 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
PTCHD3-201ENST00000438700 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 RBP4P02753 201 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 Q0VG73 95 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 TNXAQ16473 311 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 CLEC7AQ9BXN2 247 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 SVEP1Q4LDE5 3571 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 HELTA6NFD8 242 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 HYPMO75409 117 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 CA1P00915 261 aaPredicted RBP11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 GNG4P50150 75 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 RNASE8Q8TDE3 154 aaKnown RBP11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 SLC25A2Q9BXI2 301 aa11.09□□□□□ -0.63
PTCHD3-201ENST00000438700 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 OVOL3O00110 214 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 CCL25O15444 150 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 MOSP00540 346 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGLV1-47P01700 117 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 PYYP10082 97 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 Q6ZN92 141 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 TNFRSF14Q92956 283 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 TXN2Q99757 166 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 ZNF355PQ9NSJ1 428 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 INSIG2Q9Y5U4 225 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGKV1D-37A0A075B6S9 117 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms