RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 OR2F1Q13607 317 aa12.18□□□□□ -0.46
SNRPB-202ENST00000438552 USF2Q15853 346 aaPredicted RBP12.18□□□□□ -0.46
SNRPB-202ENST00000438552 STX12Q86Y82 276 aa12.18□□□□□ -0.46
SNRPB-202ENST00000438552 TMEM252Q8N6L7 170 aa12.18□□□□□ -0.46
SNRPB-202ENST00000438552 TMEM217Q8N7C4 229 aa12.18□□□□□ -0.46
SNRPB-202ENST00000438552 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
SNRPB-202ENST00000438552 PRKDCP78527 4128 aaKnown RBP12.18□□□□□ -0.46
SNRPB-202ENST00000438552 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 CHEK1O14757 476 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 PET100P0DJ07 73 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 SULT1A1P50225 295 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 GUCA2BQ16661 112 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 TMEM144Q7Z5S9 345 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 LILRB2Q8N423 598 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 MRAPQ8TCY5 172 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 ST8SIA2Q92186 375 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 METTL26Q96S19 204 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 MBD2Q9UBB5 411 aa12.17□□□□□ -0.46
SNRPB-202ENST00000438552 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 FABP1P07148 127 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 P2RY1P47900 373 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 LYZP61626 148 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 AKAP14Q86UN6 197 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 RNF2Q99496 336 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
SNRPB-202ENST00000438552 ZNF785A8K8V0 405 aa12.15□□□□□ -0.46
SNRPB-202ENST00000438552 NPPCP23582 126 aa12.15□□□□□ -0.46
SNRPB-202ENST00000438552 GATA2P23769 480 aaPredicted RBP12.15□□□□□ -0.46
SNRPB-202ENST00000438552 CRYBB3P26998 211 aa12.15□□□□□ -0.46
SNRPB-202ENST00000438552 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNRPB-202ENST00000438552 NEURL2Q9BR09 285 aa12.15□□□□□ -0.46
SNRPB-202ENST00000438552 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
SNRPB-202ENST00000438552 UBE2L5PA0A1B0GUS4 154 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 PFDN1O60925 122 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNRPB-202ENST00000438552 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
SNRPB-202ENST00000438552 HBG1P69891 147 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 HBG2P69892 147 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 NHLH2Q02577 135 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 TMEM182Q6ZP80 229 aaPredicted RBP12.14□□□□□ -0.47
SNRPB-202ENST00000438552 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
SNRPB-202ENST00000438552 CYP2G1PQ6ZSU1 146 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 SLC25A31Q9H0C2 315 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 VSIRQ9H7M9 311 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 RABAC1Q9UI14 185 aa12.14□□□□□ -0.47
SNRPB-202ENST00000438552 IGKV3-7A0A075B6H7 116 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 S100A11P31949 105 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 BMI1P35226 326 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 BPIFCQ8NFQ6 507 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 NARS2Q96I59 477 aaKnown RBP12.13□□□□□ -0.47
SNRPB-202ENST00000438552 TMEM147Q9BVK8 224 aa12.13□□□□□ -0.47
SNRPB-202ENST00000438552 LSM4Q9Y4Z0 139 aaKnown RBP12.13□□□□□ -0.47
SNRPB-202ENST00000438552 TSPAN4O14817 238 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 EIF2B2P49770 351 aaKnown RBP12.12□□□□□ -0.47
SNRPB-202ENST00000438552 CD81P60033 236 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 VWC2Q2TAL6 325 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 GTSCR1Q86UQ5 136 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 TCTE3Q8IZS6 198 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 OR5C1Q8NGR4 320 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 ST6GAL2Q96JF0 529 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 MGST2Q99735 147 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 U3KQE9 123 aa12.12□□□□□ -0.47
SNRPB-202ENST00000438552 A0A1W2PS18 150 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 AGPAT2O15120 278 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 DFFBO76075 338 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 CD7P09564 240 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 LINC00869P0C866 280 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 LYL1P12980 280 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 RAP2BP61225 183 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 BAXQ07812 192 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 CLINT1Q14677 625 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 Q5BKY6 102 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 FAM90A2PQ658T7 463 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 Q8N1Y9 231 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 STPG3Q8N7X2 389 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 THAP6Q8TBB0 222 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 SPAG8Q99932 426 aaPredicted RBP12.11□□□□□ -0.47
SNRPB-202ENST00000438552 WFDC10AQ9H1F0 79 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 DOK5Q9P104 306 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
SNRPB-202ENST00000438552 ORM2P19652 201 aa12.1□□□□□ -0.47
SNRPB-202ENST00000438552 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
SNRPB-202ENST00000438552 TFPI2P48307 235 aa12.1□□□□□ -0.47
SNRPB-202ENST00000438552 SELENOTP62341 195 aa12.1□□□□□ -0.47
SNRPB-202ENST00000438552 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
SNRPB-202ENST00000438552 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
SNRPB-202ENST00000438552 GBGT1Q8N5D6 347 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms