RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 LGI3Q8N145 548 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 DUSP18Q8NEJ0 188 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 SLC24A4Q8NFF2 622 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 OR4X1Q8NH49 305 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 RBKSQ9H477 322 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 GAR1Q9NY12 217 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
HERPUD2-206ENST00000438224 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 USP17L23D6RBM5 183 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 CORTO00230 105 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 PLA2G10O15496 165 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 SFT2D2O95562 160 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 IL7P13232 177 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 NPY1RP25929 384 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 HTR2BP41595 481 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 CENPSQ8N2Z9 138 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 LRTM2Q8N967 370 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 DEDD2Q8WXF8 326 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 VSIRQ9H7M9 311 aa6.33□□□□□ -1.4
HERPUD2-206ENST00000438224 IGKV3-7A0A075B6H7 116 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 TRAV14DV4A0A0A6YYC5 116 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 DUXBA0A1W2PPF3 345 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 MPTX1A8MV57 137 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 NDUFB6O95139 128 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 IAPPP10997 89 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 SRPXP78539 464 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 TRIQKQ629K1 86 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 FAM24BQ8N5W8 94 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 OR1S1Q8NH92 325 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 MUC7Q8TAX7 377 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
HERPUD2-206ENST00000438224 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 IGKV1D-37A0A075B6S9 117 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 C9orf170A2RU37 121 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 NAP1L6A6NFF2 107 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 ADAP1O75689 374 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 DFFBO76075 338 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 IFNA10P01566 189 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 MBPP02686 304 aaPredicted RBP6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 HOXB5P09067 269 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 ANXA3P12429 323 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 ANXA7P20073 488 aaKnown RBP6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 CRYBB3P26998 211 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 OR10J1P30954 320 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 TFPI2P48307 235 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 DHRS2Q13268 280 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 GGNBP1Q5YKI7 109 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 APRG1Q8IVJ8 170 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 GINS3Q9BRX5 216 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
HERPUD2-206ENST00000438224 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 RPS10-NUDT3A0A1W2PQS6 291 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 PRSS46E5RG02 174 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 SLC25A4P12235 298 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 SLC25A6P12236 298 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 YPEL3P61236 119 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 LAMTOR1Q6IAA8 161 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 OR1S2Q8NGQ3 325 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 ACY3Q96HD9 319 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 OVOL2Q9BRP0 275 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 NDUFA13Q9P0J0 144 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 U3KQ87 197 aa6.3□□□□□ -1.4
HERPUD2-206ENST00000438224 TRGV11A0A075B6L2 103 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 IGKV1OR2-108A0A075B7D4 117 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 TRAV30A0A087WSZ9 112 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 OR4E1P0C645 316 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 P2RY1P47900 373 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 INPP1P49441 399 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 GAMTQ14353 236 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 LYG2Q86SG7 212 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 MS4A6AQ9H2W1 248 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 TMED3Q9Y3Q3 217 aa6.29□□□□□ -1.4
HERPUD2-206ENST00000438224 FAM90A26D6RGX4 464 aa6.28□□□□□ -1.4
HERPUD2-206ENST00000438224 H3BP45 60 aa6.28□□□□□ -1.4
HERPUD2-206ENST00000438224 K7EQG2 157 aa6.28□□□□□ -1.4
HERPUD2-206ENST00000438224 WRBO00258 174 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms