RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 PAXXQ9BUH6 204 aa13.19□□□□□ -0.3
GSE1-206ENST00000438180 GAR1Q9NY12 217 aaKnown RBP13.19□□□□□ -0.3
GSE1-206ENST00000438180 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
GSE1-206ENST00000438180 Q56UQ5 140 aa13.18□□□□□ -0.3
GSE1-206ENST00000438180 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
GSE1-206ENST00000438180 FBXL7Q9UJT9 491 aa13.18□□□□□ -0.3
GSE1-206ENST00000438180 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
GSE1-206ENST00000438180 OR2J3O76001 311 aa13.17□□□□□ -0.3
GSE1-206ENST00000438180 LYZP61626 148 aa13.17□□□□□ -0.3
GSE1-206ENST00000438180 CYB5R2Q6BCY4 276 aa13.17□□□□□ -0.3
GSE1-206ENST00000438180 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
GSE1-206ENST00000438180 GSX1Q9H4S2 264 aaPredicted RBP13.17□□□□□ -0.3
GSE1-206ENST00000438180 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 NECAP1Q8NC96 275 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 NDUFB8O95169 186 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 OR10J4P0C629 311 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 S100A7P31151 101 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 AKR1C3P42330 323 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 KIAA0141Q14154 515 aaPredicted RBP13.16□□□□□ -0.3
GSE1-206ENST00000438180 LY6EQ16553 131 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 Q8WTZ3 238 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 CR1P17927 2039 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
GSE1-206ENST00000438180 TRBV9A0A0B4J1U6 114 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 TRAV5A0A0B4J249 113 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 TRAV41A0A0B4J266 112 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 NDUFB4O95168 129 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 AMY1AP04745 511 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 MORN5Q5VZ52 161 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 C9orf139Q6ZV77 190 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 OR5R1Q8NH85 324 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 TCEAL7Q9BRU2 100 aa13.15□□□□□ -0.3
GSE1-206ENST00000438180 CELSR2Q9HCU4 2923 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 CXorf65A6NEN9 183 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 OR2C1O95371 312 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 IGF1P05019 195 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 RHOGP84095 191 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 ADIRFQ15847 76 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 C9orf152Q5JTZ5 239 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 KRTAP1-3Q8IUG1 177 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 RNF125Q96EQ8 232 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 TMEM242Q9NWH2 141 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 MRPL27Q9P0M9 148 aaKnown RBP13.14□□□□□ -0.31
GSE1-206ENST00000438180 ABCA1O95477 2261 aa13.14□□□□□ -0.31
GSE1-206ENST00000438180 SCO2A0A1W2PP80 73 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 FSHBP01225 129 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 IGHG2P01859 326 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 SLC25A39Q9BZJ4 359 aaPredicted RBP13.13□□□□□ -0.31
GSE1-206ENST00000438180 PRRC2AP48634 2157 aaKnown RBP13.13□□□□□ -0.31
GSE1-206ENST00000438180 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 SH2D7A6NKC9 451 aaPredicted RBP13.13□□□□□ -0.31
GSE1-206ENST00000438180 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 G3V318 75 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 H3BUA1 57 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 IL4P05112 153 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 NPPCP23582 126 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 ZNF491Q8N8L2 437 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 FXYD5Q96DB9 178 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
GSE1-206ENST00000438180 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
GSE1-206ENST00000438180 POLQO75417 2590 aa13.12□□□□□ -0.31
GSE1-206ENST00000438180 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
GSE1-206ENST00000438180 PYYP10082 97 aa13.12□□□□□ -0.31
GSE1-206ENST00000438180 RPL23P62829 140 aaKnown RBP13.12□□□□□ -0.31
GSE1-206ENST00000438180 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
GSE1-206ENST00000438180 CENPEQ02224 2701 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 AP4M1O00189 453 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 BRI3O95415 125 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 SHANK2-AS3Q9BTD1 123 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 S4R3C0 116 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 ABCA12Q86UK0 2595 aa13.11□□□□□ -0.31
GSE1-206ENST00000438180 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 H3BRN7 92 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 GP9P14770 177 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 SUMO1P63165 101 aaKnown RBP13.1□□□□□ -0.31
GSE1-206ENST00000438180 ZNF580Q9UK33 172 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 LY96Q9Y6Y9 160 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 C9JCJ5 164 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 CLDN34H7C241 214 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 CTSGP08311 255 aa13.1□□□□□ -0.31
GSE1-206ENST00000438180 NBEAP1P0C6P0 100 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms