RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 ATP5L2Q7Z4Y8 100 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 RPP25LQ8N5L8 163 aaKnown RBP5.25□□□□□ -1.57
MCF2-205ENST00000437564 ZNF441Q8N8Z8 693 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 Q96MF0 132 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 ODF3Q96PU9 254 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 CHAC1Q9BUX1 264 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 ZMAT4Q9H898 229 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 KLF13Q9Y2Y9 288 aaPredicted RBP5.25□□□□□ -1.57
MCF2-205ENST00000437564 SCN5AQ14524 2016 aa5.25□□□□□ -1.57
MCF2-205ENST00000437564 DOCK9Q9BZ29 2069 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 POLR2AP24928 1970 aaKnown RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 CASP8AP2Q9UKL3 1982 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 SPINT2O43291 252 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 IGKCP01834 107 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 PYYP10082 97 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 COX5AP20674 150 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 QRFPP83859 136 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 CD69Q07108 199 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 LOXL1Q08397 574 aaPredicted RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 VMA21Q3ZAQ7 101 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 ZNF493Q6ZR52 646 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 LYPD6Q86Y78 171 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 RND1Q92730 232 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 TTTY10Q9BZA0 68 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 SSC5DA1L4H1 1573 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 NUP210Q8TEM1 1887 aaPredicted RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 EPM2AB3EWF7 344 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 K7EQS6 105 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 K7ERJ3 54 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 ASPHD1Q5U4P2 390 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 C1orf140Q5VVS0 124 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 DGAT2L6Q6ZPD8 337 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 SLC25A48Q6ZT89 311 aaKnown RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 ODF3L1Q8IXM7 274 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 FAM19A4Q96LR4 140 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 SHANK2-AS3Q9BTD1 123 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 OCIAD1Q9NX40 245 aa5.24□□□□□ -1.57
MCF2-205ENST00000437564 KLK5Q9Y337 293 aaPredicted RBP5.24□□□□□ -1.57
MCF2-205ENST00000437564 KIAA2026Q5HYC2 2103 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 GREB1LQ9C091 1923 aaPredicted RBP5.23□□□□□ -1.57
MCF2-205ENST00000437564 TRAV12-2A0A075B6T6 113 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 LILRA5A6NI73 299 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 C15orf62A8K5M9 175 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 C17orf51A8MQB3 221 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 TMEM14DPA8MWL7 114 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 K7EM74 188 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 ATOX1O00244 68 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 TIMM23O14925 209 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 OXTP01178 125 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 GYPBP06028 91 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 COX6A1P12074 109 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 FKBP2P26885 142 aaKnown RBP5.23□□□□□ -1.57
MCF2-205ENST00000437564 GCHFRP30047 84 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 CXCL5P42830 114 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 CXorf67Q86X51 503 aaPredicted RBP5.23□□□□□ -1.57
MCF2-205ENST00000437564 OR5AS1Q8N127 324 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 SLC22A24Q8N4F4 322 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 ZNF525Q8N782 197 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 CLEC4CQ8WTT0 213 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 TAF15Q92804 592 aaKnown RBP eCLIP5.23□□□□□ -1.57
MCF2-205ENST00000437564 C11orf52Q96A22 123 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 NABP1Q96AH0 204 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 MGST2Q99735 147 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 SLC25A2Q9BXI2 301 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 C20orf141Q9NUB4 165 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 PILRAQ9UKJ1 303 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 ANAPC1Q9H1A4 1944 aa5.23□□□□□ -1.57
MCF2-205ENST00000437564 HCFC1P51610 2035 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 C5orf63A6NC05 138 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 HOXA3O43365 443 aaPredicted RBP5.22□□□□□ -1.57
MCF2-205ENST00000437564 HILS1P60008 231 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 POLR2LP62875 67 aaKnown RBP5.22□□□□□ -1.57
MCF2-205ENST00000437564 RSPO1Q2MKA7 263 aaPredicted RBP5.22□□□□□ -1.57
MCF2-205ENST00000437564 ZC2HC1BQ5TFG8 222 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 FKBP1CQ5VVH2 108 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 PDPNQ86YL7 162 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 C11orf53Q8IXP5 236 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 EXPH5Q8NEV8 1989 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 TRBV20OR9-2A0A075B6H5 130 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 NPYP01303 97 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 ACYP1P07311 99 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 CD40P25942 277 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 UBE2D3P61077 147 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 UBE2D2P62837 147 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 CFHR1Q03591 330 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 ARFRP1Q13795 201 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 SLC48A1Q6P1K1 146 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 C22orf39Q6P5X5 142 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 EPDR1Q9UM22 224 aa5.22□□□□□ -1.57
MCF2-205ENST00000437564 PAPPA2Q9BXP8 1791 aa5.21□□□□□ -1.58
MCF2-205ENST00000437564 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms